FMO10193.5prime Sequence
1035 bp (1033 high quality bases) assembled on 2010-11-05
> FMO10193.5prime
CAGTCGACATGCTGGCTCATAACCTAGGTTTCCATAAAAAGCGCCTTTTT
TCAAACATGAAGGCTGTTTTACAGGATCGGGGTGTCATAGGCTTATCCCT
CGAAGAATGCGATTTGGAAAGAACTTTGCTTGGAGGACAGAGTTTCCGAT
GGCGATCCATATGCGATGGTAATAGAACGAAATATGGCGGAGTGGTGTTC
AACACCTACTGGGTGCTCCAGCAAGAAGAATCCTTCATAACTTACGAGGC
ATACGGAACCAGCAGTCCTTTGGCCACGAAGGACTATTCTTCCTTGATAT
CTGACTACCTACGTGTTGATTTCGACCTAAAGGTCAACCAAAAAGATTGG
TTAAGCAAAGATGATAACTTTGTGAAGTTCTTGAGTAAGCCTGTGCGCCT
CCTTTCTCAGGAGCCGTTCGAAAACATTTTTAGCTTCCTTTGCAGTCAGA
ACAATAACATCAAGCGCATATCATCTATGATTGAATGGTTTTGCGCTACA
TTTGGCACCAAGATTGGTCACTTCAATGGTGCCGATGCGTATACATTTCC
CACGATAAATAGATTCCACGACATCCCATGCGAGGATCTTAATGCCCAGC
TAAGGGCTGCCAAGTTCGGTTATCGGGCCAAGTTCATAGCACAAACGCTG
CAAGAGATCCAGAAAAAGGGGGGACAAAACTGGTTCATAAGCCTAAAGAG
CATGCCGTTCGAAAAAGCTCGCGAGGAGCTGACACTGCTACCCGGAATCG
GATACAAAGTGGCCGATTGCATCTGCCTTATGTCAATGGGTCACTTGGAG
TCAGTGCCCGTCGACATTCATATTTACAGAATTGCCCAAAATTACTACCT
GCCACATCTACCGGCCAAAGACGTAACCAAGAGATTTACGAGAGGTCTCG
AAACATTTTCAAAGCTACACGGAAGTATGCGGTTGGGCTCAGCTATTCTC
TTTTCTGCCGATTTGAGTCAATTCAAATACTTCCACAGTTGCTTGTAGAA
AATCATAAAACTAAAAGGCCAGCTTTCTAGACCAT
FMO10193.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-RA | 1307 | CG1795-RA | 162..1167 | 9..1002 | 4730 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8691064..8691528 | 466..924 | 2045 | 98.5 | Plus |
| X | 23542271 | X | 8690685..8691003 | 148..466 | 1595 | 100 | Plus |
| X | 23542271 | X | 8690488..8690627 | 9..148 | 700 | 100 | Plus |
| X | 23542271 | X | 8691611..8691665 | 945..997 | 195 | 94.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:26 has no hits.
FMO10193.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:13:17 Download gff for
FMO10193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 157..1172 | 5..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:10:40 Download gff for
FMO10193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 159..1174 | 5..1010 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:40:58 Download gff for
FMO10193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 159..1174 | 5..1010 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:40:58 Download gff for
FMO10193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8690686..8691003 | 149..466 | 100 | -> | Plus |
| X | 8690485..8690627 | 5..148 | 98 | -> | Plus |
| X | 8691065..8691551 | 467..944 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:10:40 Download gff for
FMO10193.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8584518..8584660 | 5..148 | 98 | -> | Plus |
| arm_X | 8584719..8585036 | 149..466 | 100 | -> | Plus |
| arm_X | 8585098..8585584 | 467..944 | 98 | -> | Plus |
