Clone FMO10201 Report

Search the DGRC for FMO10201

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:102
Well:1
Vector:pMK33-CFH-BD
Associated Gene/TranscriptVhaM9.7-a-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10201.5prime Sequence

281 bp (281 high quality bases) assembled on 2010-11-11

> FMO10201.5prime
CAGTCGACATGGGTGCCGCTTTCTTTCCCGTGCTGTTTTTCACCGCCTTG
TGGGGCGGTGTGGGCATCGCCATGCCCATAATGACCCCCAAAGGACCTCA
CCAGAATCTGATCCGCTGCATCCTGATGCTGACCGCCGCCTGCTGCTGGC
TCTTCTGGCTATGTTGCTACATGGCCCAAATGAATCCCTTGATCGGGCCC
AAACTAAAGCGCGATGTGGTGGCCATGATTGGAAGGTCCTGGAACAACCC
AATTGTGGCTGGTGCAAGCTTTCTAGACCAT

FMO10201.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:52
Subject Length Description Subject Range Query Range Score Percent Strand
VhaM9.7-a-RC 710 CG1268-RC 60..314 9..263 1275 100 Plus
VhaM9.7-a-RB 471 CG1268-RB 52..306 9..263 1275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4262814..4263068 9..263 1275 100 Plus
Blast to na_te.dros performed 2014-11-26 17:01:51
Subject Length Description Subject Range Query Range Score Percent Strand
GATE 8507 GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). 8165..8210 125..170 113 71.7 Plus

FMO10201.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:23 Download gff for FMO10201.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1268-RC 63..317 9..263 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:43 Download gff for FMO10201.5prime
Subject Subject Range Query Range Percent Splice Strand
VhaM9.7-a-RB 52..306 9..263 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:40 Download gff for FMO10201.5prime
Subject Subject Range Query Range Percent Splice Strand
VhaM9.7-a-RB 52..306 9..263 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:40 Download gff for FMO10201.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4262814..4263068 9..263 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:43 Download gff for FMO10201.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4262814..4263068 9..263 100   Plus