FMO10205.5prime Sequence
726 bp (201 high quality bases) assembled on 2010-11-11
> FMO10205.5prime
CAGTCGACATGACTGACAAGTTAGATGCGGAACAATTTAACGACGACGAA
CTAGAGGCACCTGCTTGGCTGAATCGTCAATTTATAGAGGAAATTCTGAG
CGCGTACGAAGATTCCCCGGAACTAAAAGTTGTCGATCTTAAAATCACAC
CCGCAAGTGCCCAGGGAGATCACTATGCCAGCGTTATGTTCCGAACAACT
GCACAGTGCACCACCGCGAAGGGAAAGTTCAGTAGGCCACTAATCATCAA
GGCGATGCCCGAGCAGGATGGACACAAGAAGGATATGCTCAGCGAATCGC
ATCTATTCGAAACCGAGATCGGAATGTACTGCCAGGTTCTTCCGGAATTC
GAGAGAATTCTGCGGGAATCCGGAGACGATACAACGCTATTTGTTCCCTG
CATTTACCATAGCCTGGAGCCGCGTAAGGTGATGATATTTGAGGACCTTG
TGCCCAACCCCATATTATGTCATTCGAGACCGTCCGGTTGCTCAGGAAGA
ACTCAAAACAGCCTTTGCTAAACTGGCCAAATGGCATGCAATTAGCATGA
CCCCCCCCCCGGAGCAACCTGACTTCCTAAAGGAGTTTAAGTATGGCCTC
TTCGAGATGCCCACCCCCCCCCACCTAATTTTTTTTATTACAACTGGCAT
GCAGAGCTTCATTGAAATGCTGGCCCCCCCCACCCCATTTTTTTTTTTTT
TTTCCCCCCCTTCGAAAAGATAAAGT
FMO10205.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31300-RA | 1474 | CG31300-RA | 72..732 | 9..673 | 2830 | 95.3 | Plus |
| CG11893-RA | 1415 | CG11893-RA | 53..475 | 23..445 | 665 | 77.4 | Plus |
| CG31104-RA | 1382 | CG31104-RA | 91..491 | 45..445 | 655 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25283691..25284231 | 9..550 | 2555 | 98.5 | Plus |
| 3R | 32079331 | 3R | 25285563..25285963 | 45..445 | 655 | 77.6 | Plus |
| 3R | 32079331 | 3R | 25289941..25290363 | 23..445 | 645 | 76.8 | Plus |
| 3R | 32079331 | 3R | 25304361..25304650 | 156..445 | 310 | 73.8 | Plus |
| 3R | 32079331 | 3R | 25287638..25287930 | 162..454 | 295 | 73.4 | Plus |
| 3R | 32079331 | 3R | 25284305..25284412 | 563..673 | 275 | 87.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:02:02 has no hits.
FMO10205.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:25 Download gff for
FMO10205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31300-RA | 62..779 | 1..726 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:53 Download gff for
FMO10205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31300-RA | 64..781 | 1..726 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:46 Download gff for
FMO10205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31300-RA | 64..781 | 1..726 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:46 Download gff for
FMO10205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25283683..25284230 | 1..549 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:53 Download gff for
FMO10205.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21109405..21109952 | 1..549 | 97 | -> | Plus |
