FMO10207.5prime Sequence
963 bp (674 high quality bases) assembled on 2010-11-11
> FMO10207.5prime
CAGTCGACATGGCATCTCTGAGCGAAACACTTCGTAGCCACTGGCCCATC
GCTTTGTTCGGTGTGATCCTCTTCGTGGCTGGGGGCACGGAGCTCTACTG
GAACGAGGGACGAGCCGTGCACAATATGATGGCGCTGGACGAGGCACACG
CCGACATCTACTCGGTGCGCTTCACGGAGGAGGAACAGGAGGTGGGCCTC
GAGGGCAGAATCGTTCACCTATCCGGACCCATTCTCGTGGGCGAACCGCT
CACCGAACCCGACTACAACATTCAGTTGCTGGCGGTGAAGCTCCGGCGAC
GCGTCCAAATGTACCAGTGGGTCGAGGAGGCGGTCGAGCACAACTACGGC
GACAGCGTGGGAACGACGCATTCGGACTCCCGCACCTACTATTACACGCG
GGAATGGCGTGATAAGATCGTGGACTCGCGAAACTTCTACAACCGCCACG
GACAACCCAATCCCAGTCACTTTCCCATCGAAAGCCACGTTCAGGTGGCG
GATGCCGTCTTCATTGGACGCTATGAACTGGGTGCGGAGGTGAAGGACAA
GTTTAACAACTACCAGGAGCTCACTTCGGACATTCGGCCAGAGGATAGTG
GCGTCAAGCTGCCCCTGATTTATATATTATCACACCAATGATGTGTTCAA
TCCGGAGGTGGGTGACCCCCCCCCCTCCCCATTCAGCTTCACGGGAATGG
ACGGCGAGGTGTTCAGCGTGCTGGGCAAGCTGTCGGGCAACTAACTGGTG
TCTTACATAACCTCCCGTGGCGTTCCACTCCTGTACTATTATTCTTGGTG
GGCTCACTGTCCAGGAAGTGTTCCGGTTGGAGGCTCGTGCCCAGGTCTTG
CACACCTGGTGGTGGCGCTTCGTCGGCTGGCTGCTGATCTTCTTCCGCCG
TCATCTTTTATACTATCTTTTTATCCCTCCCTCTGCTGTCTGTACCGGTG
CCGCTTATTGGTG
FMO10207.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8111-RA | 1340 | CG8111-RA | 88..969 | 9..895 | 3870 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7914096..7914651 | 895..335 | 2145 | 93.4 | Minus |
3L | 28110227 | 3L | 7914708..7915033 | 334..9 | 1630 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 17:02:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1a | 5108 | Rt1a DME278684 5108bp Derived from AJ278684 (AJ278684.1) (Rel. 64, Last updated, Version 1). | 3069..3098 | 80..51 | 114 | 86.7 | Minus |
FMO10207.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:26 Download gff for
FMO10207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8111-RA | 77..975 | 1..906 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:58 Download gff for
FMO10207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8111-RA | 81..979 | 1..906 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:49 Download gff for
FMO10207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8111-RA | 81..979 | 1..906 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:49 Download gff for
FMO10207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7914708..7915037 | 1..334 | 98 | | Minus |
3L | 7914088..7914651 | 335..903 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:58 Download gff for
FMO10207.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7907808..7908137 | 1..334 | 98 | | Minus |
arm_3L | 7907188..7907751 | 335..903 | 93 | <- | Minus |