FMO10212.5prime Sequence
1048 bp (772 high quality bases) assembled on 2010-11-11
> FMO10212.5prime
CAGTCGACATGATGTTCACGGGCACCAATCAGCAGCAGGACACGCGGTTC
AGCGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTCGGCGATTGCCT
GAACAAGAGGGTGGATATGTCGAAAGTCAAGCTGGACGTACTGCGTCCGT
GGATCAGCAAGAAGATCACCGACATCCTGCACATCGAGGACGACGTGGTC
GTCGAGTTTGTCTACAATCAGCTGGAGGAGGAGAAGTATCCGTGCCCCAA
GAAAATGCAGATCAATATGACGGGCTTCTTGAACGGCCGAAATGCCCGCC
AGTTTATGGGTGAACTTTGGGCCCTGCTGCTTTCGGCACAGGAAAGCGAT
TCGGGTATACCAGCGGAGTTTATACAGCAGAAAAAGGACGAGATACTCAA
ACGGGAGGAGGAACAGCGGCAGCGGGATCGATCGAGATCCCGTTCGCGTT
CCCGCCCCCAACGAGACAGTTCTAGGCGAGATCGGCAGCGTGACCGCTCC
AAATCCAAGTCCCGCTCCAGATCCCGCTCAATGAAGCCGGCCAACAACAA
CGGTTCGGTGCCCAGTGCCGCACGAGAAGCGGCCGCCAATGCGGCTGCCA
AAATCCGTAAACGCGGATCCTCCTCCGCCGCGCGTCCCGGCTCCAGGGAG
CGGAGATCCAGCCGACGACCACTTTCATTTTTTTATTTTCACGCTCGCGA
ACCGCCGGCAAAAAGACAGGCTCGGTGGAGCCCGCACCCGCCAAGACTGT
CAACGGCCGCCACTCGACGGACAATTCTTCTTCGGTACCGCCGGCCTCCA
AGAACAAGTCGCGCTCCCGTTCGCATTCCCGGTCGCGATCGCCGCGCAGT
CGATCTCGATCGCCCAGCGCCAAGCGGTCACGTTCCCACAGTTTCTTTTC
GATGCAGTCGCCGACGAGGACGCTCCAGCAGCATATCTTTGTCGCCGGGA
GCGCAACCAGGATCAGTTTGAGCACCGACGCACAAGAACAGTTGTGCCAA
AACCAGCGGCAATATTCGCAATCAATTCGTTGTGTTACTTCGGGCTAG
FMO10212.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SRm160-RA | 3862 | CG11274-RA | 433..1439 | 9..1021 | 4610 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13037423..13038392 | 20..992 | 4400 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:01:49 has no hits.
FMO10212.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:22 Download gff for
FMO10212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SRm160-RA | 420..1440 | 1..1029 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:41 Download gff for
FMO10212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SRm160-RA | 425..1445 | 1..1029 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:39 Download gff for
FMO10212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SRm160-RA | 425..1445 | 1..1029 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:39 Download gff for
FMO10212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13037423..13038424 | 20..1029 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:41 Download gff for
FMO10212.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13030523..13031524 | 20..1029 | 97 | | Plus |