FMO10215.5prime Sequence
487 bp (359 high quality bases) assembled on 2010-11-11
> FMO10215.5prime
CAGTCGACATGGAGGCAGAACAACAAGAATTCGCTGTGAAACAATTCATT
GATCTCTGCAACAATCTAGGTGCTAACTGCAGCACGACGACAGCCACATC
CCCGTCAACTTCCTCCTCCTCAGCCAGCAGCACGCAGAACTTAATAGCAG
TAGTGCCGCCACAGTTGCAGCAGCTGCAGGTGCAATTACCGGCGCCAGGT
GGAGGAGGAGGAGCAGGTGCAGGAGGAGGAGGTGGTGGAGGTGGGGGAGC
TGCGCCTGTGAGGCGCCCCATCTCGCATACGACAGCCGTGAAGTTTTTGT
ACGCCCGTAAATTTGATATACCTCTAGCAGTCTCACTGTACGAACAGCAT
GAACTGATCCGCATGACGGAGTATCTACCCACCCGATACGGAAGTGGAGC
CCTTGCGCGGCGAGTTGCAGACCGGCAAGTTTTTTTTTCCTGCCCGCACG
CACTTCCAGTGGTGCCACTCACGCAATTTTTCACGTC
FMO10215.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0232-RC | 3053 | CG32697-RC | 276..730 | 9..462 | 1930 | 95.2 | Plus |
| l(1)G0232-RG | 5668 | CG32697-RG | 488..918 | 33..462 | 1810 | 94.9 | Plus |
| l(1)G0232-RF | 5646 | CG32697-RF | 466..896 | 33..462 | 1810 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9643967..9644367 | 431..33 | 1730 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:02:23 has no hits.
FMO10215.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:30 Download gff for
FMO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0232-RC | 38..507 | 1..471 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:09 Download gff for
FMO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0232-RC | 269..738 | 1..471 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:59 Download gff for
FMO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0232-RC | 269..738 | 1..471 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:59 Download gff for
FMO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9643970..9644367 | 33..428 | 95 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:09 Download gff for
FMO10215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9538003..9538400 | 33..428 | 95 | <- | Minus |
