FMO10217.5prime Sequence
648 bp (648 high quality bases) assembled on 2010-11-11
> FMO10217.5prime
CAGTCGACATGGCCAGCGTATGGAAGCGATTGCAGCGCAATTTCAAGCGA
GCCGCCAAATTCCAGTTCACCGCATCGTACCACGATCTGCATCTGGAAAC
CACCGCCAAGTGGCGGCCGTCGAACCTCTCTATCGTTTGGACCAGAAGAT
CTAGACGAGTGGCCAGTGCTCCTTTGCCATGGGAGCCGGACATGATGAAC
CCCTTGGTGGGCAATATATCCTGGCCAGTGCCCGACAATCACACCATATC
CGTCACCCTGTTTAAGGATCCTCGGACACACGAGCTGGAGGACAAGGACT
GGACGTTTGTCATCGAAGATGTCACTCCAATGGGCAAGAAACGTGTGCTG
GCCAATGCCAGCATTAATATGAGGAAGTATGCCAGCATAGAATCCACTCA
GCAGAGCTTTACCTTGAGCCTAAAGCCAGTCTCGAAGAAGATTACTGCAG
CCAGTTTGGAGCTCACGATTAGCTGTGTATTTTTGCGAGAAGGAAACGCT
ACAGACGAGGACATGCAGAGCGTTGTCTCCATGATGTCCGTGAACAACAA
TGATGTGGCGCCTTTGGATGACTTGGAGGATATTCCAGATCTTGATGGCT
TTAGTGAAATTACGGACCCCCCCCCCTGACTTTACACAGCAACTGGAG
FMO10217.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ehbp1-RG | 3829 | CG15609-RG | 383..1021 | 9..648 | 3040 | 98.4 | Plus |
| Ehbp1-RF | 4361 | CG15609-RF | 387..1025 | 9..648 | 3040 | 98.4 | Plus |
| Ehbp1-RI | 4152 | CG15609-RI | 387..1025 | 9..648 | 3040 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17013787..17013997 | 322..112 | 1055 | 100 | Minus |
| 2R | 25286936 | 2R | 17013546..17013727 | 502..321 | 895 | 99.5 | Minus |
| 2R | 25286936 | 2R | 17013367..17013481 | 617..503 | 575 | 100 | Minus |
| 2R | 25286936 | 2R | 17014948..17015052 | 113..9 | 525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:02:28 has no hits.
FMO10217.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:31 Download gff for
FMO10217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15609-RG | 375..1013 | 9..648 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:12 Download gff for
FMO10217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ehbp1-RI | 387..1025 | 9..648 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:03 Download gff for
FMO10217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ehbp1-RI | 387..1025 | 9..648 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:03 Download gff for
FMO10217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17014949..17015052 | 9..112 | 100 | | Minus |
| 2R | 17013337..17013481 | 503..648 | 93 | <- | Minus |
| 2R | 17013546..17013727 | 321..502 | 99 | <- | Minus |
| 2R | 17013789..17013996 | 113..320 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:12 Download gff for
FMO10217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12900842..12900986 | 503..648 | 93 | <- | Minus |
| arm_2R | 12901051..12901232 | 321..502 | 99 | <- | Minus |
| arm_2R | 12901294..12901501 | 113..320 | 100 | <- | Minus |
| arm_2R | 12902454..12902557 | 9..112 | 100 | | Minus |
