FMO10220.5prime Sequence
992 bp (726 high quality bases) assembled on 2010-11-11
> FMO10220.5prime
CAGTCGACATGGATGTGGATTTACTGCCGCTGAGAAAGCGAATAACGAAC
ACTTTCAAGTTATGTGGATTCCTGATCCGCTCGGAGAACAGTTCCTACCT
GGCGGAGCAGCTGCTGCCCTTCGACGCAGCGGAACGGGACAAATGGCTGA
CGGTGATCACCGAGAATCTCCAAAGCCAAAAGCTTTTGACGCCTCATGTG
GAGCGAGCCGCCCTGGAGAAGGCTATCAATGAACTTAACCGGGTGGGATT
GGATGAAGGGGAGACGGTCTTTGCCCTGATCGATGCCTTTACGGTGCCCC
GTTTTCGGTACAACCAGCGGATAAAGAAATTCGAACTGGACACACAGCCG
CGCCAGTTGCTGACCGCTCCGCGCATGAAATCGGACTACATGCAGCAACG
ATATGCCATGTTACTACAGAAAACTCTGCGACACGACCTCTTTGCCCCAG
CCGTCATCCACGATGGCGTTGGAGCCGAGGCCCAGGCCAAGAAATTTAAG
CTCCAGTTCGCTGAGAACCTGCTGGCCACGTCGGCGATGAAGGAGGCAGT
TGTTTTGCGACTACTTACCCAGCTTAAGGAGGGCAAGTTCTATGTCGAGG
ATCCCACGGGTTGCGTCCACCTACATCTCACTGGAGCCCGTTTCCATGCC
GGCTTCTTCTGCGAGGGCTGCTTTGCCCCCCCCCCATGTTTATTATTACA
ACGGTGTGCTCAAGGTTGATGGCCTGCGCTTTCCACCCGCGGAATTTGCT
AACAGCTTTCGAGCATTTTTCGGCACCGCCCACACCTCGGGGCGGTGAAT
CTGCTAAGCTGCTGAAGTACTCAGCCGGACTACAGGAACTGGAGCGTACC
ACACGGAAACAACCATTGTTTTCCTTTCCGACGTACGGTTGGATCTGCCC
GCTCTCTCCACGAAGAAGCTGTAACAAGTCGCTCCGTGGGCTATGATTTC
CTGCCCGCCCCCAAGCTATAGTGCTCATGGGGCCCCTTTCAC
FMO10220.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DNApol-epsilon58-RA | 1688 | CG10489-RA | 57..1025 | 9..985 | 3805 | 93.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5896713..5897379 | 675..9 | 3050 | 97.2 | Minus |
3L | 28110227 | 3L | 5896433..5896617 | 899..715 | 665 | 93 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:02:38 has no hits.
FMO10220.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:33 Download gff for
FMO10220.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pole2-RA | 1..974 | 9..992 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:18 Download gff for
FMO10220.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pole2-RA | 57..1030 | 9..992 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:07 Download gff for
FMO10220.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DNApol-epsilon58-RA | 57..1030 | 9..992 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:07 Download gff for
FMO10220.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5896674..5897379 | 9..715 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:18 Download gff for
FMO10220.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5889774..5890479 | 9..715 | 95 | | Minus |