Clone FMO10221 Report

Search the DGRC for FMO10221

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:102
Well:21
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9601-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10221.5prime Sequence

1011 bp (680 high quality bases) assembled on 2010-11-11

> FMO10221.5prime
CACTCGACATGTCTATGGCTAAATACCTAAACCGATCCGTTGGAAAAGCT
GGCAAGGATGTGGCCGCCAGGATATGCACCCTTAAACCCACTGAGCCGGA
ACACCATTCTATACACCTGACCGCTGGGGAGAATTTCGTGGGACGCAGCC
GGGAGACCGGCATCCGAGATTCCAAGTGCTCGAAGCGACAGATTCAACTG
CAAGTGGACCTAAAAAAGGCTGTAGTTTCACTTAAAGTCCTGGGAGTTAA
TCCCTGCGGCGTCAATGGTCTGATGCTTATGCAGAACGGGGAACGCGAGC
TGAAGCACGGAGACTTGGTGGAGATCGTTTACGGCAGGCATCAGTTCGAG
GTCGTCTTTAACCCTCCACCGGAGTATGATAAGGAGAAAGCTGAGCCGTT
GTCCACAACACTATCACCGTCAGAGAAATCCGAGAGGTGGGACTCATCTG
GCAATGGTAACCTGGTTATCTTTACCAGCGTCGGCGTTAAAGGTTCTGAA
AAGATAGCTGGCTACGACATGGACGGCACCATTATAAAAACAAAATCGGG
ACTGGTGTTCCCCAAAAACACCGACGACTGGCAGATCATATTTCCCGAAG
TGCCGGAGAAACTAAACACTCTCCACAATAGATGGGTTTAAAATCTGTCT
CTTCACCAACCAAGGAGGCATTGCTCGCGCAACACTTTAACTTATATGAC
TTTAATGTCAAGATCAAGCATATTGTGGCTAAACTGGGACTTCCAACTTC
ATAGTATTTATAGTCATATGTGATGGATTTTATCGCCCACCTTTTGATTT
AGAATGTGGCAGCACTTAAAGAGTGAAATGAATGATGGCGTTGAGATTCA
GAAGATCGATGTTTCTTCGTCGGCGATGCAGCGGAGACCGGAGACGGCCA
CGCAGCCACCTAGTTGATTCTATATATCACTCATCAGTAGACGACTTTTT
TGCAGCCAACGTGGGATTTCATTCTACCCTCAGAGGTTCATTCCTGGGCA
ACAAGTGCAGC

FMO10221.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-RA 1856 CG9601-RA 75..1077 9..1011 4085 94.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8342461..8343442 992..9 3725 94.3 Minus
Blast to na_te.dros performed on 2014-11-26 17:02:41 has no hits.

FMO10221.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:33 Download gff for FMO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 49..1058 1..1011 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:21 Download gff for FMO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 68..1077 1..1011 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:09 Download gff for FMO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 68..1077 1..1011 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:09 Download gff for FMO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 8342440..8343448 1..1011 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:21 Download gff for FMO10221.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4168162..4169170 1..1011 94   Minus