FMO10224.5prime Sequence
1085 bp (876 high quality bases) assembled on 2010-11-11
> FMO10224.5prime
CAGTCGACATGCACGTGGAGGAGCTGAGAGCCAGCCTGCAGAGCTTTGGA
TGGCCGGATTATTTGGTCTTTTGCCTGATGTTGGCCATTTGCGCCGTTAT
CGGTATATATTTTTGCCTGCAACTGCGCTTAGAGTCCAGGAAACAAAAGG
CCAATGGCTCAGAGGAGGCGGCGAGTAGTGCTGCCTCGTATTTGGTTGGT
GGCAGGCAGATGAAGATCTTTCCCATAACCATGTCACTGATATCCAGCTT
TATATCTGGAATTACACTTTTGGGTACTCCCACAGAGGTTTATCTTTATG
GTGCTCAGTACATGTACATTATGGGATCGCTGGTTTTAATGGGCTTCTGC
ATGTACTACTTCTTCTTGCTGGTCTTTCACGAACTCAATTTGATATCCAC
TTATAAGTATTTGGAACAGCGATATAACCGAAGTTTAAGGCTTTTCGGAT
CTGTCATGTTTATTGTGGCTTCGCTACTTTGGCTTCCAATTGTGATTTAT
GTACCGGCTATAGCATTCAATCAGGCCACTGGAGTGAACATCCATATAGT
GACGCCCATTGTGTGTGTGGTTTGCATTTTCTATACTTGCATTGGAGGTT
TGAAGGCGGTGGTTTGGACGGATGTCATCCAAACGTTGATCATGTTCGGT
GCGATGGCTTTGGTTTTGATTAATTGAACCTTGTATATCGGCGGACCTGG
AGTTGTGTGGCACAACGCCCAAGACACAGCTCGATTGTAAGTACCCAATT
TTAGTGCGGATCTAAGCGAGCAGTTATATCCTTTTATTCCCTGGTTTTGG
GCGGTGTAGCTCATTGGCTCAAGTCAAATGCAATTAGTCAGATATGATCC
AGAGATATTTATCGCTACCCACGCTTCGTGCTGCTATAGTATTGCTATAT
GTACATTTATCGCTGGTGTTTTGGCCTTTTTGATGATCTGCGGATATACG
GTCTTTTGATCTATGCCACCTATCTCATGTGATCCTTTGGCAAACGAGTT
GACCCAAAGAATCGATCAACTTTGCCACTTTGGTATGACCTTTGGCTCAT
ATCCGGGTTACCAGGAGTATTTGTAGCGGGGTTCT
FMO10224.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9657-RB | 2557 | CG9657-RB | 132..1207 | 9..1077 | 4695 | 96.7 | Plus |
| CG9657-RA | 2054 | CG9657-RA | 132..1207 | 9..1077 | 4695 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7420119..7420669 | 473..1023 | 2065 | 94.4 | Plus |
| X | 23542271 | X | 7418725..7418963 | 9..247 | 1195 | 100 | Plus |
| X | 23542271 | X | 7419771..7419933 | 245..407 | 800 | 99.4 | Plus |
| X | 23542271 | X | 7419990..7420057 | 406..473 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:03:26 has no hits.
FMO10224.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:43 Download gff for
FMO10224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9657-RA | 132..1215 | 9..1085 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:58 Download gff for
FMO10224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9657-RA | 132..1215 | 9..1085 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:34 Download gff for
FMO10224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9657-RA | 132..1215 | 9..1085 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:34 Download gff for
FMO10224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7418725..7418963 | 9..247 | 100 | -> | Plus |
| X | 7419774..7419933 | 248..407 | 99 | -> | Plus |
| X | 7419992..7420057 | 408..473 | 100 | -> | Plus |
| X | 7420120..7420738 | 474..1085 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:58 Download gff for
FMO10224.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7312758..7312996 | 9..247 | 100 | -> | Plus |
| arm_X | 7313807..7313966 | 248..407 | 99 | -> | Plus |
| arm_X | 7314025..7314090 | 408..473 | 100 | -> | Plus |
| arm_X | 7314153..7314771 | 474..1085 | 93 | | Plus |
