FMO10225.5prime Sequence
1035 bp (754 high quality bases) assembled on 2010-11-11
> FMO10225.5prime
CAGTCGACATGAATAGAACGCGAAGGATACTCGAAGTGATCGTTATCCTT
ATTCTAGCGATATCGAGTTGTGATGGCAGTGGAGGAGATATCCCCCTGCG
ATGCGACGAGTACGATTCCATGGGATACATGGACGTGAATGAGGCGTTTT
GCACGGTCACCGGATTCACGGTCACACACAGTCAAAATGTCGTGATCAAG
AACATACCACCCGGAAATATGGTCAAGTTCATGAAGTTTTACGAATCAAC
GCTGCTCTATATGCCCTTCCATCTATTCGAAACATTCCCATATCTCAAGA
CCCTCGATGTCTCGAATACGAATATTTTGGAGCTAACGAGAAATGCATTC
AGTGCTGCGAGTAATCTCACCTATCTGAATCTGGCCTACAATAATCTGAC
ATCTATCCAGACTTCTGTGTTTATTGGCGCCAATGTTCTGATGCGTTTGG
ATTTGTCCTACAATGAGATATCCTCGCTGACTGTGCATGCCTTCTGTGGC
CTGCACACCATTAGCCAGATTTATCTAACGGGCAATCTGTTGAAGGAGCT
GCACAACGATATCTTCAAGGATAACGAGTACTTGGAGAAGGTGTCCTTCC
TAGGGAAATCTACTGACCAGCATTCAACCGGAGGTTTTTCGCAATATGCG
GCGCATCCCCCCAGGTTAATCTATCCAATACTCGCCTGATTTTCATCCAT
CCGGACACTTTTGCGGATGCGGCAAGCTTGGAGAATCTGGTGTTGTCCTA
TAATGACTTGAAAAACTTCCAGCTGACGGAGAAGAATATTGTGCATCAGC
TGCACTTGGATAATAATTATCTTACAAATTTGACCATAATGCAACTCGAT
TCGTTCGCGCCAGTCCCCACCCACACTCTCTTAGCTCTTTCTGCACCAGA
GTTTGCATAATCGAAACATTGGGATTTAAGTGCCAACAAGTTGAGTAGCA
TATCGAATATTCACCATATCACACATATGCTTCTACTTTGCATGCTATCC
GCATAATTCCAATTGGTCCCGCTTAATATCAGCCC
FMO10225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4950-RB | 1796 | CG4950-RB | 16..1029 | 9..1033 | 4490 | 96.8 | Plus |
| CG4950-RC | 2360 | CG4950-RC | 16..1029 | 9..1033 | 4490 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16267174..16268141 | 981..9 | 4240 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:03:28 has no hits.
FMO10225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:43 Download gff for
FMO10225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4950-RB | 16..1031 | 9..1035 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:16:00 Download gff for
FMO10225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4950-RC | 16..1031 | 9..1035 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:37 Download gff for
FMO10225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4950-RC | 16..1031 | 9..1035 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:37 Download gff for
FMO10225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16267125..16268141 | 9..1035 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:16:00 Download gff for
FMO10225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16260225..16261241 | 9..1035 | 96 | | Minus |
