FMO10227.5prime Sequence
197 bp (197 high quality bases) assembled on 2010-11-11
> FMO10227.5prime
CAGTCGACATGCGAGCAAAGGCACCACACGATCGCGACTTTGGTCACAGT
GGACGTGGCGGTCGCGGAGGCGATCGAGGCGGCGATGATCGGCGAGGAGG
CGGCGGCGGAGGCAATCGCTTCGGTGGCGGCGGTGGCGGTGGCGATTACC
ACGGCATAAGGAATGGACGCGTCGAGAAGCGACGCGATGACCGCGGA
FMO10227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rm62-RI | 3153 | CG10279-RI | 679..868 | 8..197 | 950 | 100 | Plus |
Rm62-RE | 3160 | CG10279-RE | 691..880 | 8..197 | 950 | 100 | Plus |
Rm62-RH | 2760 | CG10279-RH | 296..480 | 13..197 | 895 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6004949..6005126 | 197..20 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:03:34 has no hits.
FMO10227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:44 Download gff for
FMO10227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rm62-RE | 418..612 | 1..196 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:16:03 Download gff for
FMO10227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rm62-RE | 685..879 | 1..196 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:40 Download gff for
FMO10227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rm62-RE | 685..879 | 1..196 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:40 Download gff for
FMO10227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6004950..6005126 | 20..196 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:16:03 Download gff for
FMO10227.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1830672..1830848 | 20..196 | 100 | <- | Minus |