FMO10231.5prime Sequence
1061 bp (671 high quality bases) assembled on 2010-11-11
> FMO10231.5prime
CAGTCGACATGAGCGAAGGGGTACCAGCGTCGCCCGTGGCCATTGGCGAA
CTCAAGTACGAGGATGTGTCGCAGCTAAATTTTTCCAAACTGTACTCGCC
CAAGATGAAAAGCGTATACTGGCGCTACTTTGGATTCCCCTCGAACGACA
ATAATGAGGTGATTACCAAACAGAATGTGGTCTGCATTAAGTGTCACAAG
GTGCTGACCAACCATGGCAACACCACCAATTTGCGTGCGCATCTCCAGCA
CCGACACAAGGATCTGTTCAAGGAGCTGTGCCAGGAGCACGACATCCATG
TGCCGCCGCGCAAGACGCCGCGTAATGTATCCCATCCACCGCTGTCCAAG
CGGAATGTTTCCTCGCGGCGGGTCAAACTGGAGTTCATTAATAACCGGAA
CCACGATAACGCTTCCGATGATGAACTGGACGAAGCAGCCGTGGCAACTG
CACCCATGCAGGCGGAGGAGGACGCCTCCTCGCAAACCATGCTGTACGAG
ACCATGGTGCCCTTCACCTACGACGAGGCCGAAAATCTGGTACCCCCCCG
AGGAGCGCCTAGTTATGGAACCAAAGTACGGACGCAAACGCAAAGTGGCC
ACTCCATCGAGTGCCCTGATGCACGGGCGTGTCATCAAGCACGAGGAAGG
CGGCTATGCCGCCCCCCCCCACCCCCGCCAATCTGGCCGAACCCCTTACG
GACATTGTGATTAAGGATCTGCGCACTGTGCATTCTCTGTACGATGTCTG
TTTTGGTGAATTCCTGCGTCCACTCCTATGTAATTCTGCAGCCATGCCCG
ACCCACACAAGATCGACTCTTTGATCAATGAGATGCACGCCTCCAAGTTT
CTGGAGATTGGCGAAATCACGCGCGATTTCCCCTCCGACAACCCCCCTCT
CTCTCGCCTTGACACCACGCGTGAATGTTGAACAGCGGCGCTTCCTTAGC
ATCTTCCATCACTTTCTGGACGAGAGACGCACTCAGTTCGCGGCATGCTG
TATGCCACCGCGGCAGTACAACGACCTACATCGTCTATTGACTGATTTAC
TGACGACTTCT
FMO10231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dref-RB | 2739 | CG5838-RB | 345..1392 | 9..1061 | 4390 | 95.1 | Plus |
| Dref-RA | 2872 | CG5838-RA | 345..1392 | 9..1061 | 4390 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9965862..9966885 | 1036..9 | 4200 | 95.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:03:43 has no hits.
FMO10231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:46 Download gff for
FMO10231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dref-RA | 563..1618 | 1..1061 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:16:10 Download gff for
FMO10231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dref-RA | 337..1392 | 1..1061 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:45 Download gff for
FMO10231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dref-RA | 337..1392 | 1..1061 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:45 Download gff for
FMO10231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9965838..9966892 | 1..1061 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:16:10 Download gff for
FMO10231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9965838..9966892 | 1..1061 | 94 | | Minus |
