FMO10232.5prime Sequence
1044 bp (760 high quality bases) assembled on 2010-11-11
> FMO10232.5prime
CAGTCGACATGGCGAAGAAGTTTAGTAACATAATATTCTATCTGACCCTG
ATAATCATAGCCATCTGTGTGGCCTGTATCTGGATGTTCTCGGGCTTCCG
TCACGAATATGGCAAATTCAACATGATCCTGGTTGCCTTCTTGGCCGTTA
CTTTACTTCAGATCCTAATCTTTACGCCCATTAAGTTCACAATTATGTCG
CTGGATGCCGCCTTCTGGCCGGCCCACCAAGCACCGGAGACTCCCGACGA
GAATGCCAATGTGGACACGTTCATGGACAATCTCAGACTGCGCCTCCGGA
CGCTGCGGAGTGAGCTGATGATCACGGAGAGGCATCGGAACGAGAGGGTC
AACCTGAAGTATCGCCTGATTACCGAGGAACTTTGGCTCACGGGCAAGCT
GTTCCTGGTTTACTTCTTCATGGCCTTGGCTTTCTTCGATGAGTTGCTGT
ACTTTAACACAGAGGCCACGGAGTTACTGTTCCAATGTAATCATGGGGAT
GCGTTCGGACTATTGAGTGTGGGGGATGTGCCGGATATATATTTTTTTGT
GGTGTCCTCGTTAGTGCTGGCCTTTACGGATGGCAAGAACACCAGTGGCG
CACCTCCTTGTATCCATGCGGAGGGCACTAGACTACTGGGCGTGGTGAGA
CTGACGCCCCCTCATTACATATAGCAACCGATTGGGTCTATCGCTTCCTG
TGTTCACTGAGCGGGACTTTTCGGAGAGCTGGACACTGCCCTACGAAAGG
GTTCCCTACCCGCCACAATTACTGTTCCATCTACACACCCTGCCTGCCCA
GTGTTTCTGTTGCTCGGGACAACCTACTTATGGGCATTAACCACGTGGGG
CACATGTTCAACTATCCCGGAATCGGACCGCCCCCTTTATTTTTACTCTC
AGCACCCCCGCCACAAAAGCCTGAAAATTATCGATTACTTGATGAAGAAA
ACTGGCTGGATGCGATACGACCGCTTTGTCCATGGATTTCAGCTTGTACC
ACGACCGATGCCAACATCTTTACTGATTGTTTCACCCTTGGGGG
FMO10232.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| brv1-RA | 2673 | CG9472-RA | 30..1039 | 9..1023 | 4315 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19485460..19486469 | 1023..9 | 4115 | 95.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:02:55 has no hits.
FMO10232.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:36 Download gff for
FMO10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9472-RA | 1..1010 | 9..1023 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:29 Download gff for
FMO10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brv1-RA | 25..1039 | 1..1023 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:15 Download gff for
FMO10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brv1-RA | 25..1039 | 1..1023 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:15 Download gff for
FMO10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19485460..19486474 | 1..1023 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:29 Download gff for
FMO10232.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19478560..19479574 | 1..1023 | 95 | | Minus |
