FMO10235.5prime Sequence
1041 bp (716 high quality bases) assembled on 2010-11-11
> FMO10235.5prime
CAGTCGACATGGAGGATGAGGACTCAGATTACTTGCCGCTGCCGAACACC
AATAGCTTGAGTATTCCGAATGATCCGGTCATGCTGGCCGTGTACGAGCT
TTACAAGCCGCCCCTGACCGCCAATCGGAATTTACTCTCGGAGCGTAATC
GGGAATTCTTCGCAGAGGCGTTTAACGATGCCGACCAAGTGCCCACTTTG
GCGGATCTCTGCGTCCGACAGATGGCTAAACGTGGAAATGCCAACGTGCC
CGACGAGGTGCTTCAAGATCCGCGAAAGATGCGCATCCACTACGATTCAC
TCGATGTGGATCTGCCACTGCGTGAGTGCTACTGCGTAGAGGATGCGAGC
TACTGGAGGCGGGTGGTCCTAGCTATATGTTCCGAGACATGCCTTGCACT
GAAGGGGTTGCAGGATTACGACTGGCGCGGCAAGGGACTGAGCCTGAAGT
ACATGGCCCTGGTGGAGGCCTGTCCGGCCGCCCTTTGGCCAGAGAAAGAG
ATGACCGAACTAGCCGAGCTAATAAAGGATCATGTTCGCTGCATGGACAT
TCGGCACCTGCAGCCGCTGTCGGAGTATGCCTTTCGGAAAACAAAACGTG
AGGAAGACGACTCGCCACCGTAAATAACATCCGAGGAGTCTGGTGGCATG
GAAATCTCCAGTGATGAGCCCCTGACCCCATAATATTTCTATGATGAGGG
GAGGAAGAAGAGGAGGGGGCGGGTTCATCGCCTCTGACCAGAAAAGGGCA
ATTGGATTCAATACAAATTTACGCTGCATGTTTTCTGATGATGAAGATGA
CTCCGGCACGAGCGTCGCAACGTCGACATGAACGCAACGTCGCCCGCCAA
CGATTGCGTGATCTGAAGGCTGCCAGGAGGCGGAGCATGACGATCTTATG
TTTATGATGGTCCCAGATGCGGAAGCCCGGGGAACCAGAGCCACGAAAGA
AAAGAAGCGAAGGCAGCGTATAAAGGGCCCCTTTGATATCCGCGTGCAGC
CTGCAACCAGACGATGGCCATGAACAAGGTTTTTGTACTAA
FMO10235.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18171-RA | 2538 | CG18171-RA | 129..1156 | 9..1033 | 4345 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1722007..1723025 | 1023..9 | 4070 | 95.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:02:50 has no hits.
FMO10235.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:34 Download gff for
FMO10235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18171-RA | 129..1160 | 9..1039 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:25 Download gff for
FMO10235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18171-RA | 129..1162 | 9..1041 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:11 Download gff for
FMO10235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18171-RA | 129..1162 | 9..1041 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:11 Download gff for
FMO10235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1721991..1723025 | 9..1041 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:25 Download gff for
FMO10235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1721991..1723025 | 9..1041 | 95 | | Minus |
