FMO10236.5prime Sequence
1065 bp (779 high quality bases) assembled on 2010-11-11
> FMO10236.5prime
CAGTCGACATGACGGAATCGGCTAACTTTCTATTCGACTTGGTCATCACC
AATCTGAATATTTTTGGCGTAACGATTGACGAACCCGCCAAACTCCTGGT
GGAAACCAAGGTTGCCGGAAAATCAGTGAAGGTAACGTCCAGCCGAATCA
ATGTCGACCAGTTTGTGGCCGGCAGGGAGTTTGAGCTCCCAATGGAAGCA
TCGACATTGCGTCAAAGTCTGGAGGAGAAGGGTTTGACTTTGGCGGGTGT
TTACCAGGGATCAACTCTTGGCAAGGCCACGGGGAACTTCCCTGTGGAGT
TTCTTGACAAGATCAGCCCCACGATGAACGATCTGGTGCACGAAGATACA
CTCGATTTGGTTCGTCGAGTTGTTGTATATGGAACGGTGAGCGTTCTAAT
CCGCTTGACCGTAAAGTGCGAGGAGCACCCAGAGCAGAAGCCTTCAAGGC
AAAGTCTCCCCCGAACCAGCAAATCATCGATGATACTACCGAAGAAAGAG
AAAAGCGGACGAGTCAGTTGTGCTAGCCAGGGCCCGACCTTCAATCCTCA
GGATGTGATGTTTCTCATCGGCGATCCTGATCCTTTACTTCGAATTCCCT
CGGAGCCGTGCTCTGAACTTCTATCCGAAATAGGAGATGAACGCCTGAAG
CTGGACTTGCAGCGCTACAAAACCTTGTTAAAATCGTCTAGCAATCTTTC
CAGATGATGACCGCTGTCCCCACGCAAAAACCCTCATTTATGCAACTTAA
AAAGCTCACCGAGGAGTATTCCCACCATCATTGATTCTGTGACCAAGAAG
TCAAAGAAATGGAACCCGCAATCGAGCTCGTTGGTTCCTACGGAGCCACC
TTCCGATGCGAATGTCATAACTCCATTTTACACACCGCCGCCATATTAAT
TCATGATTCTCGTGAAATCTGGCCATACCTGTTTCTGTTAGATCCGACTT
ATTACATGGCCGTGAAACCTATACGGTCTGTCCTGTCTGCTGGTGCTCCA
TGTCGTGATGCCAAAATATGCACCAATGCTCATCAATGCAATACCTAAAG
CAGTCCCATACCTCC
FMO10236.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31533-RA | 2704 | CG31533-RA | 141..1185 | 9..1061 | 4540 | 96.3 | Plus |
CG31327-RA | 2719 | CG31327-RA | 639..854 | 530..747 | 245 | 74.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14156281..14157291 | 1025..9 | 4190 | 96.6 | Minus |
3R | 32079331 | 3R | 14159453..14159640 | 718..530 | 205 | 75.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:02:52 has no hits.
FMO10236.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:35 Download gff for
FMO10236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31533-RA | 1..1048 | 9..1065 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:27 Download gff for
FMO10236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31533-RA | 141..1188 | 9..1065 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:13 Download gff for
FMO10236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31533-RA | 141..1188 | 9..1065 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:13 Download gff for
FMO10236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14156244..14157291 | 9..1065 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:27 Download gff for
FMO10236.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9981966..9983013 | 9..1065 | 96 | | Minus |