Clone FMO10238 Report

Search the DGRC for FMO10238

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:102
Well:38
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14523-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10238.5prime Sequence

1067 bp (903 high quality bases) assembled on 2010-11-11

> FMO10238.5prime
CAGTCGACATGGAGAACTTTGGTATCGCACATGCCCTGCTCCAGCTACTG
CTGCTCCATCTGGTGGGAAGTGGTCGAGGTCACCTGCTAACTGGTCAACC
GGCCATTGACCTGCGCATCCAGGCACGGGAGCAGCTGATCTCGCAGTCCA
ATGACAGCGCCTATGTCCAGCGACTGATGCGTCTGTCCAAGTCCGCCGAA
ATGCGCAGCTATATGCAGCAGGACGCGGATGCCTGCGAAAACTTCTACGA
CTACAGCTGCGGAAATTGGCCCCAGATCAATCCGGCCAACGATGCCTATC
CCCGGGAGACGAACTTCGTGCAGCTGCTGCTCAAGGCCTATAGCCACAAG
CAGCAGCGTCTAATGGAGCAGCCGGCGAACGTGGAAACGGATGAGGTGGC
CGTGCTCCGACTGAAGGAGTTCTATGCCAGTTGCCTGCTCTTTCGACAGG
TACCGGAGGATCTCTACAGACGTCAGTTGCAGGAAATTGTGGCTGATTTC
GGACGCATGCCCGTCCTAAGTCTCCCGGGTCAGGAGTGGCCAGCCGAGGA
GTTCGATTGGCTGGACACAGTGGCGCGAATAAAGCGGCAGTACGGCTTTG
ACATCCTTTTGCTCTTTCAGCACTCGGCGGATCGCATATACGTGGGACAG
CCGAAGCAGATTCTTCCGGAGGCCAACCCCCCACGCCGTGGCAGAAGATA
TAGCCAATCATTTGGAACGTCACTTGGGTGTGGATCCCAAAGTGGCCGTA
ACAACGGCAAGGGAAATTACAGAGTTTGAGCAAAAGATTGTCGCTATTAT
GGTGGATCGTCGAGTTGGAGTGATGTCCAAATTGTACACTCCAAGTGACG
CGGACTACGTTGATGTCTCAAAACTCACCCAGTTCGTGGAAACTGTCCTT
GACCGGGCAGTTGTCGGCCAACGAGTCCCTATATCAGCATGTTCCTGATT
ATCTTATGAAAATAGATGAGCTGGTGACGGAGACACCACCACACGTACTG
GCTAACTATGTCTTCCATGGAGCCCTTTTAAGCACTCTACTACGAGCGGA
GCGGAATCGGATGTGGG

FMO10238.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG14523-RA 2099 CG14523-RA 22..1080 4..1066 4945 98 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28879088..28880101 1019..4 4815 98.7 Minus
Blast to na_te.dros performed on 2014-11-26 17:03:07 has no hits.

FMO10238.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:39 Download gff for FMO10238.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14523-RA 137..1199 1..1067 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:42 Download gff for FMO10238.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14523-RA 18..1080 1..1067 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:23 Download gff for FMO10238.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14523-RA 18..1080 1..1067 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:23 Download gff for FMO10238.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28879041..28880100 1..1067 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:42 Download gff for FMO10238.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24704763..24705822 1..1067 97   Minus