FMO10238.5prime Sequence
1067 bp (903 high quality bases) assembled on 2010-11-11
> FMO10238.5prime
CAGTCGACATGGAGAACTTTGGTATCGCACATGCCCTGCTCCAGCTACTG
CTGCTCCATCTGGTGGGAAGTGGTCGAGGTCACCTGCTAACTGGTCAACC
GGCCATTGACCTGCGCATCCAGGCACGGGAGCAGCTGATCTCGCAGTCCA
ATGACAGCGCCTATGTCCAGCGACTGATGCGTCTGTCCAAGTCCGCCGAA
ATGCGCAGCTATATGCAGCAGGACGCGGATGCCTGCGAAAACTTCTACGA
CTACAGCTGCGGAAATTGGCCCCAGATCAATCCGGCCAACGATGCCTATC
CCCGGGAGACGAACTTCGTGCAGCTGCTGCTCAAGGCCTATAGCCACAAG
CAGCAGCGTCTAATGGAGCAGCCGGCGAACGTGGAAACGGATGAGGTGGC
CGTGCTCCGACTGAAGGAGTTCTATGCCAGTTGCCTGCTCTTTCGACAGG
TACCGGAGGATCTCTACAGACGTCAGTTGCAGGAAATTGTGGCTGATTTC
GGACGCATGCCCGTCCTAAGTCTCCCGGGTCAGGAGTGGCCAGCCGAGGA
GTTCGATTGGCTGGACACAGTGGCGCGAATAAAGCGGCAGTACGGCTTTG
ACATCCTTTTGCTCTTTCAGCACTCGGCGGATCGCATATACGTGGGACAG
CCGAAGCAGATTCTTCCGGAGGCCAACCCCCCACGCCGTGGCAGAAGATA
TAGCCAATCATTTGGAACGTCACTTGGGTGTGGATCCCAAAGTGGCCGTA
ACAACGGCAAGGGAAATTACAGAGTTTGAGCAAAAGATTGTCGCTATTAT
GGTGGATCGTCGAGTTGGAGTGATGTCCAAATTGTACACTCCAAGTGACG
CGGACTACGTTGATGTCTCAAAACTCACCCAGTTCGTGGAAACTGTCCTT
GACCGGGCAGTTGTCGGCCAACGAGTCCCTATATCAGCATGTTCCTGATT
ATCTTATGAAAATAGATGAGCTGGTGACGGAGACACCACCACACGTACTG
GCTAACTATGTCTTCCATGGAGCCCTTTTAAGCACTCTACTACGAGCGGA
GCGGAATCGGATGTGGG
FMO10238.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14523-RA | 2099 | CG14523-RA | 22..1080 | 4..1066 | 4945 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28879088..28880101 | 1019..4 | 4815 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:03:07 has no hits.
FMO10238.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:39 Download gff for
FMO10238.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14523-RA | 137..1199 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:42 Download gff for
FMO10238.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14523-RA | 18..1080 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:23 Download gff for
FMO10238.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14523-RA | 18..1080 | 1..1067 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:23 Download gff for
FMO10238.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28879041..28880100 | 1..1067 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:42 Download gff for
FMO10238.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24704763..24705822 | 1..1067 | 97 | | Minus |