FMO10240.5prime Sequence
971 bp (723 high quality bases) assembled on 2010-11-11
> FMO10240.5prime
CAGTCGACATGAATCGTATATCGAATCCTTCGCGTCGCCAGGCGAGTGAC
GTCTTCATTGGTGACCCCTTCAAAATTCACTCATACAACTTTCGCTATGC
CGACAAGCCATTTTATCCGGTCCAGAACTATCAAAGACCTCCGGCGGCAC
CGACTCCGCCGGCACTGGTGAAGAAGGCCTCCTTCCAGACCTTCTACCAC
AATCCCAGATTCAGCCAGGATCCCGAGTACATTCCGGCAAAAAAGAGTCC
ACAAACTAGCTCCTATAGGCGTCGCCTTTTGCTGGAATCTATGGATATGC
CCTTGGGATCTACGGTGACAACGCCGGAGAGACAGAGTGTACCGGTGGCT
CCGCAGACGAAGCGTTCTCCCACAGCCACGGATTCGCCGCTCCTCAGGAC
TTGCTGTCAAAGTGTGCGCTACGAGGCTATGAGACGGGGTCCAAGCAACA
CGACTTTGTGCCAGAGTACCACGAATCTCATACGATCAGCTGGCGGCGGT
GTGCCTTCTACTTCAACCACCACCTTCTCCATGGACTCCAACGCCCATCT
GCAGAACAGAAGAAGCGGCTGCGGTATCAGCATCGACCTCTGCAGTGTGG
GTTCGCAATCTGAGGTGGACAACAATGTGAGCATCCAGATCGCAACGGAT
GCCACATCTGCTTAAATAATACGGACAAGGTGAGGACCAAGTCCAAACCG
GTGCGCTGTACCCCCCACACCCCCCTGCACCTTTGGCATCCACACCCCAC
TGTCCAAGTTCAATGTGAGCGAGACGAAACCTCGGACGAGTCCGGAATGG
GAGCTCCGGCTGAGAGAGAACGCACGAGCACCCGCCCCGTCAACAAAAAC
GGGAGCGGGATCCACAGTTGTTGGAGGACCGACGCTTGGAGCAGAGAGGG
AACTTCAGGAGGAGCGAGAGCGTGCCCGCCAGCGGGAGCGAGATCGTGAG
CAGCTCGCAAGCTGGAGTATA
FMO10240.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13330-RA | 2129 | CG13330-RA | 78..1034 | 9..967 | 4265 | 96.7 | Plus |
| Vmat-RE | 7325 | CG33528-RE | 4100..5040 | 967..25 | 4185 | 96.6 | Minus |
| Vmat-RF | 7141 | CG33528-RF | 3916..4856 | 967..25 | 4185 | 96.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13515417..13516345 | 25..956 | 4055 | 96.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:03:13 has no hits.
FMO10240.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:40 Download gff for
FMO10240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13330-RA | 69..1034 | 1..967 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:48 Download gff for
FMO10240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13330-RA | 69..1034 | 1..967 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:27 Download gff for
FMO10240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13330-RA | 69..1034 | 1..967 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:27 Download gff for
FMO10240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13515417..13516357 | 25..967 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:48 Download gff for
FMO10240.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9402922..9403862 | 25..967 | 96 | | Plus |
