FMO10242.5prime Sequence
755 bp (213 high quality bases) assembled on 2010-11-11
> FMO10242.5prime
CAGTCGACATGAACAGAATCATGCTGTTGGTGGCCTTTGCGGCCGGCGTT
GTGGCTGCTGGAAGGATAACTACGAATCAGGACAGGGTCCAGGGTATTGA
CCGCATGTCCTTGGAGGATCTGCAGCTCCAAAAGTTTATCCTGGATATCG
TCCAGAATATTCGTCAGCCTCTACAGCAGAGTGAGCTCATCAATCTATAT
GTGGGTCTGATTGCAGACAGTCAGCGTTATCGTGGCGGTATTGATAAGGT
GATGCATAACGTCATCGATCTGGATCGCCAGCGTCGCCTCCTCGACGAGC
ACCAGGTGTACTCCGTGGGTCGTTTGGAGCATGTGCAGCAGCTGCGTGGC
ATATACCGCCTGCTGGCTCGCGCCCAGGACTTTGAAACCCTTCGCCGTAA
TGTGGTCTACCTGCGCCGTAACATTAACCCTGTCCTGCTGGTTAATGCCT
TGGCTCTGGCCATTCCCGATAGTGAGGACACTCAAGCTCTGATCGTGCCC
GCTGTCCAGGAGCTGCTCCCCGAACTGTATCTGGATGAGGAAGTGATTCA
GCAGGTGCGCACCCCCCCCCCGGAACAAACCCAGCGCCCATCGCTCATGG
ACATCGTGGGTATGCGCCAGCGGGCTCTCCCCCCCTCCCTTTTTTTTTCC
TGATGCCCTGGAGGGAGATCCACATGCAGATGGCTCTCCCGCCCCCCCCT
CCATTTTTTTTTATTTTTTTTGCCCCCCAACGCGTCGATGTCGTCCAAAG
AAAAA
FMO10242.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbp1-RA | 3405 | CG17285-RA | 95..771 | 9..687 | 2965 | 95.9 | Plus |
| Fbp1-RD | 3399 | CG17285-RD | 95..765 | 9..687 | 2865 | 95 | Plus |
| Fbp1-RB | 3465 | CG17285-RB | 245..831 | 99..687 | 2515 | 95.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14097223..14097809 | 687..99 | 2490 | 95.2 | Minus |
| 3L | 28110227 | 3L | 14097869..14097959 | 99..9 | 455 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 17:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burdock | 6411 | Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). | 1785..1849 | 556..621 | 111 | 65.2 | Plus |
FMO10242.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:41 Download gff for
FMO10242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbp1-RA | 90..774 | 1..687 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:51 Download gff for
FMO10242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbp1-RA | 87..771 | 1..687 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:29 Download gff for
FMO10242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbp1-RA | 87..771 | 1..687 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:29 Download gff for
FMO10242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14097213..14097808 | 100..697 | 93 | <- | Minus |
| 3L | 14097869..14097967 | 1..99 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:51 Download gff for
FMO10242.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14090313..14090908 | 100..697 | 93 | <- | Minus |
| arm_3L | 14090969..14091067 | 1..99 | 96 | | Minus |
