FMO10244.5prime Sequence
919 bp (620 high quality bases) assembled on 2010-11-11
> FMO10244.5prime
CAGTCGACATGTCGCAGGTGCTTAGCCCCCACAAACAGGGCGTGTCGGAG
GCGGATGCGTTGGACTACACGAACAGCAGCTCGATCATCGAGTTCCTGGC
CAAAGAGCAGGACTGCGGCGGAATACTGAACGATCCGGACCCGGAGTCCA
TATTCCAGGAGGTGAGTCGCCTGTCCGACAGCACAGATATGCGATCCGTG
GATGAATTGCTGCAGGAAGCGGAGCGCCTGATCCAACAGCAGTTGCGTCT
CGGCGGTATTGTTCCAAAACTGGACGCTTCCGGGCCCCCTGCTCCGACCA
AAACCCTCGGAGAAGAAGCTGCCACCGGTGGTGATGGCTCTTCCTCATCC
CCGCAGTCCTCGCCGCATAGCAGCATACGGCTGAATACACGCTATACCCA
TCGCATCGAGCATTCGCCTGCTCCCTTGGCGCCAAAAACCGTCGCAGTCA
ATGGCACCCCCCCGGCCCAGATCCGGTTCCAAATCGTCGGCCTCGCCAAC
ATCGGTGCAGACGCCGCTAGAAAGCAGCAATGGATGCGGCTTTGCCGCCC
TCGTGGCTAACCTGCCATCGGCGTCGGTCATTTCCGAGGAGTCCACGCCC
AAGGACATGGACATGGAGAACCATATTTGCGGCCATGGCAAAGCTGCAAC
TCCAGCAGCTTCAGGATAATACCCCCCCACCCCCCAGGATACGATGGATG
AGATCCCCCAGGCGGAGGTGGACGCCCCCATATTTTCGCGAGCTGAGGAC
ACTGGCATAGAGGTCAGGAGTCTGCCTGAAAGGCCGCCTAATATTTTATG
TGTCGTTCATACATCCAGCCAGTCAGCCGATTCGACCGATGGCCAGCTAC
AGCGAGAAGGCGGTGGGCAGCTCACCCAAGCGCATGGTCAGCACCTTGAC
CTCACCCCCTCCCAGCAGA
FMO10244.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42699-RC | 4296 | CG42699-RC | 362..1256 | 8..907 | 3910 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5764914..5765577 | 8..673 | 3110 | 98.5 | Plus |
| X | 23542271 | X | 5784439..5784652 | 693..907 | 755 | 92.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:03:23 has no hits.
FMO10244.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:42 Download gff for
FMO10244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15770-RA | 340..1011 | 1..673 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:15:56 Download gff for
FMO10244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42699-RC | 354..1265 | 1..918 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:45:32 Download gff for
FMO10244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42699-RC | 354..1265 | 1..918 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:45:32 Download gff for
FMO10244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5764906..5765577 | 1..673 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:15:56 Download gff for
FMO10244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5658939..5659610 | 1..673 | 98 | == | Plus |
