FMO10255.5prime Sequence
788 bp (550 high quality bases) assembled on 2010-11-11
> FMO10255.5prime
CAGTCGACATGTTGCCCCCGTCCTGGCATCTAATTGGGGCCCTCCTAGTG
CTCGCGGCAACAGCGGGGGACTCCACCAACAAGATCATCTTGCCGCAGAT
TCTAAACGGTGGCGGTGGCGGCGGGGGCGTCGGAACTGCCCAGGGCAAAC
ATCCGTCTGGATCCAAGACGGTGGCAACTGGAGTGGTTCCAAACTTCGGT
GGAGCAGCTGGCAATGGAGCGGGCGGAGGAGGACCTGTGGCTGGCAGCGG
AACCGGAAGCACCGTGGTCGGCAGCAATGGCGTGATTGTGGCCGGAGGCG
GGGCCAATGTGCCGACCTCGAATTTAAACATTGTCGTCGAAGAACCCGAA
TTTACTGAATACATCGAAAACGTAACTGTACCTGCTGGACGTAATGTTAA
ACTCGGTTGCTCCGTGAAAAATCTGGGCTCATATAAGGTCGCCTGGATGC
ACTTCCAACCCCCCGCCATCCTGACCGTTCACAATCACGTGACCCCCCCC
CATCCGCGCATCAGTGTCACGCACGACAAGCACGACAGGCACCGCACGTG
CCCCCCCGCCCCTAAACAATGTGCACGAGGAGGACCGGGGTCGATATATG
TGCCAGATCAATACGGTCACCCCCTCATATTTAATTCTGGCTACCTAAAC
GTTGTCGTTCCCCCCAACATCGACCACCCCCCCCCCCCTTTTTTATTTTA
TTTTTCCCACACGGAGCCAACATTTCGCTGAGATGCCGGGTAGCGGTAGT
TTTTTTATTTTTTATTTTATGGAGCGCGACGACCCCCC
FMO10255.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31708-RC | 3384 | CG31708-RC | 575..1237 | 9..674 | 2850 | 95.5 | Plus |
| CG31708-RB | 3562 | CG31708-RB | 693..1355 | 9..674 | 2850 | 95.5 | Plus |
| CG31708-RA | 3444 | CG31708-RA | 575..1237 | 9..674 | 2850 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9066080..9066401 | 330..9 | 1610 | 100 | Minus |
| 2L | 23513712 | 2L | 9060748..9060928 | 617..436 | 590 | 89.6 | Minus |
| 2L | 23513712 | 2L | 9062398..9062506 | 439..331 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:00:08 has no hits.
FMO10255.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:02 Download gff for
FMO10255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31708-RB | 684..1428 | 1..750 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:31 Download gff for
FMO10255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31708-RA | 568..1312 | 1..750 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:39 Download gff for
FMO10255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31708-RA | 568..1312 | 1..750 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:43:39 Download gff for
FMO10255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9062400..9062506 | 331..437 | 100 | <- | Minus |
| 2L | 9066080..9066406 | 1..330 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:31 Download gff for
FMO10255.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9062400..9062506 | 331..437 | 100 | <- | Minus |
| arm_2L | 9066080..9066406 | 1..330 | 98 | | Minus |
