FMO10260.5prime Sequence
694 bp (436 high quality bases) assembled on 2010-11-11
> FMO10260.5prime
CAGTCGACATGCAGCAGGCCCCGCAGCAGCAGCAGCATCCCCATCCGCCC
AGCAGCAGCTACTACACGCAAACCGAAAGCGAGCTGCTCCAGATTGAGGC
GGGCGGCACGGGCCTGACCTTCGCCTCCCACTCGCAACGTCCCGAATCGG
CGATCAGTCAGGTGGCATCCACCGCCCACCTGGACGTGCCCTCGGCCGCC
TCCAGCGGCAGCGGGGGCAGTGCAGTCAGTGGGGGAAGCGGCGGAGCTCC
GGAATCCGCGGGTCGATTTGTGTCCCCGCTGCAGCGCCGCCACTGCCAGC
CGCCCAGCCACCTGCCGCTGAACTCGGTGGCCTCCCCGCTCCGCACCGCC
AGCTACAAGTCGGCGGTTTTTTGTCGCTGGTCATGGCTTCCACCACAGCC
ATCACCAGCAGCTGGACTTCCAGCGGAACTCGCAGTCTGGACGACGACAG
CGGCTGTGCCCTCGAGGAGTACACTTGGGTGCCGCCGGGTCTGCGGCCCG
ATCAGGTCCGTTTGTACTTCAGTCAACTGCCAGACGACAAGTGCCCTACG
TCAACAGTCCCGGCGAAAGTATCGTGTCAAGCAGTTGCTGCACCAGCTTG
CTCCTCATATAGATAACGAAGTGCGCTACTGCCACTCGCTGAGCGACGAG
GAGCCCCACGACTTGTTTATTTTTTTTGTTCAAAGAAGCGGGAG
FMO10260.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| esn-RD | 3982 | CG43722-RD | 582..1226 | 7..654 | 2945 | 97.4 | Plus |
| esn-RC | 4708 | CG43722-RC | 1308..1952 | 7..654 | 2945 | 97.4 | Plus |
| esn-RA | 3982 | CG43722-RA | 582..1226 | 7..654 | 2945 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7118479..7118977 | 7..507 | 2315 | 98.4 | Plus |
| 2R | 25286936 | 2R | 7119803..7119900 | 503..598 | 390 | 98 | Plus |
| 2R | 25286936 | 2R | 7209477..7209570 | 413..507 | 230 | 85.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:00:22 has no hits.
FMO10260.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:05 Download gff for
FMO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esn-RA | 576..1233 | 1..661 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:39 Download gff for
FMO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esn-RA | 576..1233 | 1..661 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:47 Download gff for
FMO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| esn-RA | 576..1233 | 1..661 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:43:47 Download gff for
FMO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7118473..7118975 | 1..505 | 97 | -> | Plus |
| 2R | 7119806..7119919 | 506..620 | 92 | -> | Plus |
| 2R | 7120524..7120564 | 621..661 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:39 Download gff for
FMO10260.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3005978..3006480 | 1..505 | 97 | -> | Plus |
| arm_2R | 3007311..3007424 | 506..620 | 92 | -> | Plus |
| arm_2R | 3008029..3008069 | 621..661 | 92 | | Plus |
