FMO10263.5prime Sequence
1039 bp (781 high quality bases) assembled on 2010-11-11
> FMO10263.5prime
CAGTCGACATGTTATCCAATCGGGCGTTTGGAGAAACAATTGAGGACTAT
GAAGTACAGCACTTGCTGGGTAAAGGTGGTTTTGCGACCGTCTACAAGGC
GCGGTGCCTGCACACTCACCAGGATGTGGCCATAAAGATGATCGATAAAA
AACTAATCCAGGGCACTGGACTCACTAACCGCGTTCGCCAGGAAGTGGAA
ATCCACTCCCGCCTGAAGCATCCCTCTGTGCTTCAGCTGTACACTTTCTT
TCAGGACGCCAACTATGTGTATTTGGTGCTCGAGCTGGCCCATAATGGGG
AGCTTCATCGCTATATGAACCACATCGCCAGACCCTTCACAGAGACGGAA
GCTGCTTCCATTCTGAAGCAGGTGGTGGCGGGACTTTTGTACCTGCACTC
CCACAACATCATGCACCGCGACATTTCGCTGTCCAACCTACTGCTTAGCA
GGGAAATGCACGTCAAGATAGCCGATTTTGGACTGGCCACCCAATTACAG
CGACCTGATGAGCGCCATATGACCATGTGTGGAACTCCGAACTATATTTC
GCCTGAGGTGGTATCGCGAACGTCTCACGGACTGCCCGCGGACGTCTGGA
GCGTTGGATGCATGCTGTACACCCTGCTGGTTGGACGCCCGCCCTTCGAA
ACCGATGCAGTGCAGTCAACCCTTAACCACCCTTGTGATGTCCGAGTACA
TTATGCCGGCTCACTTGTCTTACGAGGCGCAGGACCTGATAAACAAATTA
TTAAAAAAGCTCCCGCACGACGAATTACCCTGGAGCCTGTTCTCTGCCAT
CCCTTTATGTTGAAATGCTCAATGGTGGACACTCTGCGCCGGGAGCGTTG
AATGTGTTCAGCCAGAGTATGGAAAGTGGCGATAGTGGAATCATAACATT
TGCCAGCACTGACTCCCGGAATTCCCACCAAATTCGATCTGTGAAAACTC
AGACCACACAAGTGCTTCTCAAATACGGAGGATTTAGCAGTCCATCATAA
ACTGCCTTCTGAACAGAACAGGTTTATTTAGCCAGCCTC
FMO10263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SAK-RA | 3371 | CG7186-RA | 137..1165 | 9..1029 | 4705 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21514739..21515508 | 908..140 | 3615 | 98.8 | Minus |
3L | 28110227 | 3L | 21515561..21515658 | 140..43 | 490 | 100 | Minus |
3L | 28110227 | 3L | 21515715..21515751 | 45..9 | 185 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:00:28 has no hits.
FMO10263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:06 Download gff for
FMO10263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SAK-RA | 134..1173 | 9..1039 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:44 Download gff for
FMO10263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SAK-RA | 137..1176 | 9..1039 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:51 Download gff for
FMO10263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SAK-RA | 137..1176 | 9..1039 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:43:51 Download gff for
FMO10263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21514739..21515507 | 141..908 | 98 | <- | Minus |
3L | 21515561..21515656 | 45..140 | 100 | <- | Minus |
3L | 21515716..21515751 | 9..44 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:44 Download gff for
FMO10263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21507839..21508607 | 141..908 | 98 | <- | Minus |
arm_3L | 21508661..21508756 | 45..140 | 100 | <- | Minus |
arm_3L | 21508816..21508851 | 9..44 | 100 | | Minus |