FMO10265.5prime Sequence
979 bp (678 high quality bases) assembled on 2010-11-11
> FMO10265.5prime
CAGTCGACATGGTTGCCTGGCTGACGGTTAAGTCAGTGGCCATCTTTTTG
GGCCTGGCCTCTACTGCTTTTTGTGTGGCCACGATTGTGCTGGCCGTTCA
GAATGCGGACCTGGAGAACGATCTGCAGGATGCCCTCGATAAGATCGACG
CATTGACGGTGGACACCACGTCCACGTCCTCCACCTCTACCAGCACTTCC
ACGACCACCACCACTGCAAATCCCAATGGGCCCACGGATGACACCGAGCC
TGGCTCTACCACCACACCTGGCGTAGGAGGTGACACAACCCCCAGTGCAG
GAACATCTCCGGGTGGTGAAACTTCGCCATCATCCAGTACAGGAAGCACC
ACCAATCCCATCTATCCGACATTGCCGACAGGACTTCCTGATCCTGAAAA
GATCGAATGGCGCCTGCCCACGGAACTGACGCCCATCAAGTACAAGGTGT
ACTACCATCCCAACTTGACGACCGGCGCCTGTGAGGGAACCGTGCCCCTT
CACCTCCACCTGAACGCGATCACCAACCTGATCGTCCTGCACGCCAAGGA
GCTCACTGTGCACAGCATCAGCATCCTGAACATGATGGCGCGCATACGCG
TGGCCATCGATAGCATCACCCCCCCCCCATTTCCGGGAGCTGCTCCTGAT
CACGCTAAGAGAGGTCCTCAGTATGACCCACCCCCCCCTACTGTCCTCAA
GTTTCCACTGCGATCTGAGCAGTCTGGTGGGCAGCTACATCAGCAACTAC
ACGAATGCCGATGGAGTAGATAGATCAATCATTTCCACACAGAATGTTTC
TCTTTTTATGCCCGCCAAGCATTCCCCTGCTTCGATGAGCCCGCCCTTAA
AGCTCAGTTCACCATAACGGTGGCCCGTCCAAGTGGTGATGAGTACCATG
TGCTGTCCACACGCCACTGACTAGCGAGTATGACGATGACCAACACCACC
GAGGTGACTTCGCGGGAGACGTACCCATG
FMO10265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32473-RA | 3273 | CG32473-RA | 78..1046 | 9..979 | 3995 | 94.6 | Plus |
| CG32473-RB | 3002 | CG32473-RB | 601..775 | 806..979 | 610 | 91.5 | Plus |
| CG32473-RC | 3635 | CG32473-RC | 1234..1408 | 806..979 | 610 | 91.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13302798..13303180 | 19..401 | 1915 | 100 | Plus |
| 3R | 32079331 | 3R | 13304124..13304496 | 400..773 | 1415 | 92.5 | Plus |
| 3R | 32079331 | 3R | 13310176..13310309 | 806..938 | 530 | 94.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:00:30 has no hits.
FMO10265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:07 Download gff for
FMO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32473-RA | 73..1041 | 9..979 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:46 Download gff for
FMO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32473-RA | 78..1046 | 9..979 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:54 Download gff for
FMO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32473-RA | 78..1046 | 9..979 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:43:54 Download gff for
FMO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13302798..13303180 | 19..401 | 100 | -> | Plus |
| 3R | 13304126..13304496 | 402..773 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:46 Download gff for
FMO10265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9128520..9128902 | 19..401 | 100 | -> | Plus |
| arm_3R | 9129848..9130218 | 402..773 | 92 | -> | Plus |
