FMO10267.5prime Sequence
1004 bp (780 high quality bases) assembled on 2010-11-11
> FMO10267.5prime
CAGTCGACATGTCGCTGCCTCCCGAGGACACCGATTTGTCCACAAATTCC
GCATACGAATCCGCACTCCAAATCGCGAGCAATGTGTCGGCAGCACGAGT
AGTCGGTTCGGCAGTAGGACAGCGATTTTCGCCGTCGCCAGCAGCTCACC
CGAACGTGATTGAGCGCGTCGCGTCTCATGTGGACTCACGCCGCAGCACG
TTTCCAAGTTGGGGTAATCCGTCAGTAGCGCCAAGAGGATCGGAAGAAGC
AGCAGCCAACGCCACAGCAACACAACTCCTATGGGCGGAGAACCAAGGTC
TCCCGACATCGCACTTATTGCCAACTGAACAGGCATTCGAGACATTGAAC
ACTAATGCGTATTGTTCCCCGCCAGGGGATTCACGATTTACGTTCCCTAG
CCAGAACTACTCGCCGCTGCTGCCGCGGTGTGTCCCAGTTCCGAATCAGC
GTTACTCTCCAGATGGATCGCCAATACATCAACTCCATGAGCTGCAAAAT
TGTCCATTGATAGATTCGCCGATAAGACTGCGATTTCCATCCCCCTTGCC
AGAACCACCATCACTACCGACCATCACCCTTACAGTTGATGCCCTGATCG
ATCTTGACCAAAACAACCCCCCTCGCATATTATGTCCAGCAGTACAACAA
TCAGCCAGTCCTATATCAACACAACCCCCCTATATGAACTGTTAATCCAA
CTATGCGATCAGGCCTCCGAGAATAATCAACCGATTATATTACATATCGT
GGAGCACAATCCCCAGACTATAACTGAGAGCCACCAGCTATTCTTTTTTG
GTTGTCCCCGACATTCACATCAATAATATCCAGGGAGCAAGATCAGAAAT
TTGAAAATGGCATCTCGGACAAAATCATCCGATTGCAACTGAGGCTCAGG
ACCACACTCTATACTGAGATCCGAGGATGAACAACCAGATTGGTCCTTGC
AGTCCAAGAAAAAATCTCACGGGGTGCCTCTGGAGATTCAGGACCAGGAC
ACGG
FMO10267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ulp1-RA | 5498 | CG12359-RA | 187..1168 | 8..997 | 4285 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19206779..19207760 | 997..8 | 3985 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:00:35 has no hits.
FMO10267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:08 Download gff for
FMO10267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ulp1-RA | 178..1168 | 1..1004 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:51 Download gff for
FMO10267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ulp1-RA | 178..1168 | 1..1004 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:57 Download gff for
FMO10267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ulp1-RA | 181..1171 | 1..1004 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:43:57 Download gff for
FMO10267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19206770..19207764 | 1..1004 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:51 Download gff for
FMO10267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19100803..19101797 | 1..1004 | 95 | | Minus |
