Clone FMO10269 Report

Search the DGRC for FMO10269

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:102
Well:69
Vector:pMK33-CFH-BD
Associated Gene/Transcriptbin-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10269.5prime Sequence

345 bp (208 high quality bases) assembled on 2010-11-11

> FMO10269.5prime
CAGTCGACATGATTAAAAGTGAAGAAGCCTCCGATCGTTCGGTTATGACC
ATGGATCAGCTGGGTGGCTACTACCACGATCCCCGCGCCCATCCCCCTTT
CAGCCACCCACATGCACACTCCCACCCACATCAACACACCCACACTGGAC
ATCCATATAGAGCTGGGAATCTGTTAACCGGTGGCAATTACCAGGCAATG
GGTGGCGGAGAATCACCCACGGAGCTGATCGATGAGAACCGAACATCGGG
TAATGGAGCTAAACATTATATGGACGCTACGCCACTGCCAGCCCGTTCGG
CAGCACACATTAAAGCCCTAAGTGCGCTGCACGCATGGGTAACCC

FMO10269.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
bin-RA 2412 CG18647-RA 210..549 9..341 1465 97.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6990831..6991160 9..332 1245 96.1 Plus
Blast to na_te.dros performed on 2014-11-26 17:00:37 has no hits.

FMO10269.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:09 Download gff for FMO10269.5prime
Subject Subject Range Query Range Percent Splice Strand
bin-RA 202..552 1..345 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:52 Download gff for FMO10269.5prime
Subject Subject Range Query Range Percent Splice Strand
bin-RA 202..552 1..345 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:00 Download gff for FMO10269.5prime
Subject Subject Range Query Range Percent Splice Strand
bin-RA 202..552 1..345 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:00 Download gff for FMO10269.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6990823..6991173 1..345 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:52 Download gff for FMO10269.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6983923..6984273 1..345 95   Plus