FMO10270.5prime Sequence
1087 bp (860 high quality bases) assembled on 2010-11-11
> FMO10270.5prime
CAGTCGACATGACTTCCCTCGTGTACACCGTCTTTCACCTGGCCTCGCTG
CAATGTTCCGTGCGTCCGGAGATCTCGCCCTGCACCTGCGAAACGGGCAA
AGCCTGGAATCATGTGGAGCTCTCCTGCGAGAAGTTGGAATCCTTCAACG
CCGTCGTGGACAGCCTGGCCAATAAGCTCAATGCCGACACCAATATCGAC
CTAAAGATCACGCACTCGCAACTCGACGACCTGGAAATGCGCTCGTTTAC
GGATATGAACTTCAACTTGTACAAGCTACGGATGCAGTGGAACAGTCTAA
AATCGCTGCCCGAGGTGCCGTTCCGCGGGTTATCGAATGTCACCTACCTA
AGCATCGGCGACAACGACCTCGACGAGATCCCGAAGCACGCCCTGAGCCA
CATGCCGAGCCTTTTGACTCTGGACATTGGGCGGTGCAAGCTACGGGCGG
TGCAGCAGGAGGACTTCCGGGGCATACAGCGGGTAACGAATCTGATTCTG
GTGAGCAACATCATTACGCGCCTGGACCGAGGATCCTTTCCCAAGAGCCT
CCTCATCCTGCATCTGGGTAGAAACCAACTGGAGTCGCTGAATGGCTCGC
TTCACTATCTGCACAACTTGGAGTCTCTGTTCATCAATGCGAATAATATC
CCCTCCCTGGATGATGATCTACCCGATGGAGGGCAGTTGCGCCTCCTGAT
GGCTCACAATAATAGGTTGGAACGCCTGCCGGCCAATATGGCCGGTATGC
ACATTTTTGTATACTGTCCACATACACTGCAACCAGCTGAGATCCTTCGA
CCGTGTACTTCGCAATGCCGTCAATCTGTCCGAGGTCATGGCCCGATAAC
AATGAGCTGGAGTACCTGTTTCTATGTTTGTTATACTCCTCCTGCTCCAA
GGTGGAGACCCTGCAGATGGGCTGCATCACATCAGTCGCTCAACTCTTCG
CTACTGCCCATCCTCAAGCTGAAGACTGCCCAACTTCCTCGTTCAACGAC
ATCGTATTAGTTCTCCCATGGCGGACTGCACGGATTGGCGATCGCTGAGA
ACCTCCAGCCTGTCCAGTTATTCGCATTCCACGACTG
FMO10270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ltl-RB | 4108 | CG32372-RB | 689..1759 | 9..1087 | 4580 | 95.8 | Plus |
ltl-RA | 3622 | CG32372-RA | 203..1273 | 9..1087 | 4580 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7524487..7525184 | 302..1004 | 2770 | 95.2 | Plus |
3L | 28110227 | 3L | 7519685..7519977 | 9..301 | 1465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:00:40 has no hits.
FMO10270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:09 Download gff for
FMO10270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32372-RA | 198..1268 | 9..1087 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:13:54 Download gff for
FMO10270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ltl-RA | 203..1273 | 9..1087 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:02 Download gff for
FMO10270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ltl-RA | 203..1273 | 9..1087 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:02 Download gff for
FMO10270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7519685..7519977 | 9..301 | 100 | -> | Plus |
3L | 7524487..7525264 | 302..1087 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:13:54 Download gff for
FMO10270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7512785..7513077 | 9..301 | 100 | -> | Plus |
arm_3L | 7517587..7518364 | 302..1087 | 94 | | Plus |