FMO10273.5prime Sequence
307 bp (183 high quality bases) assembled on 2010-11-11
> FMO10273.5prime
CAGTCGACATGTTTGAGGAGGCTTTCGGCGATATACAGGAAATTATCAAT
GCCAGCATGGAGTTGAATGGTGGCGCCACCGGCGGAGGCAGTGTGGCAGG
AGCTGTTGGCGGAGGCGGTGCTGCACATCACATATTATCGCAGTCCCCCT
TCCCTGCCGGTAATGCCGTCGCACATTCCGCTCCCCCTGCCACAATCAAA
ATATGAAACCCAATTCTGCCCCGAACCCAAGTGCACGAAGTTGGTCCCCC
ACCTGCGTATCGTGGAAGGAACCCGACAAGCATAATATCCCGCTTTCGCT
ACAAAGG
FMO10273.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dif-RD | 2595 | CG6794-RD | 325..612 | 9..305 | 1035 | 91.9 | Plus |
| Dif-RC | 4306 | CG6794-RC | 565..852 | 9..305 | 1035 | 91.9 | Plus |
| Dif-RB | 2483 | CG6794-RB | 213..500 | 9..305 | 1035 | 91.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17418819..17419078 | 305..37 | 715 | 89.6 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:00:49 has no hits.
FMO10273.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:11 Download gff for
FMO10273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dif-RA | 554..735 | 1..184 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:01 Download gff for
FMO10273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dif-RB | 206..387 | 1..184 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:07 Download gff for
FMO10273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dif-RB | 206..387 | 1..184 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:07 Download gff for
FMO10273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17418932..17419078 | 37..184 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:01 Download gff for
FMO10273.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17418932..17419078 | 37..184 | 97 | <- | Minus |
