FMO10276.5prime Sequence
1072 bp (688 high quality bases) assembled on 2010-11-11
> FMO10276.5prime
CAGTCGACATGCATACATCGGATATCAGCATGACCCAGGATCAGGATGTG
AGCACTTGTCGCCTGTGCCACCATAATACGGATCCCAACTCGCTAAACAT
TTTCGATGACACCGTGCAGTTTTGCAAGGATGTGTCCATTGCAGAGGTTT
CCAAGAGTCTCTGGAGCGTTCAGTACGATCGCAACGAATGTTTGTCGGAG
CTCATTTGCTCAAGGTGTCTGGAGATCCTCGAAGAGGCATTCGAGCTGCG
AAAAGGAATGCAGGAGCGGGAACAGTCCCTGCAGGAGCAGCTGAAGGAGA
TGATTAAAGATCATCCGAAGCACCGTCCAGGCCTGAATGGCAACCCCGGA
GTATTCGTACCCGAGGAGGGCTGCATTATTGTGGAAGTTGATCCAGAGAA
TCTGGCAGAGAGCAGTGAAGAGGAATTCGCACTCGGCTCCGATGGGGAGT
ACGAAAACTATGACGACGATGATGAGGAGGAGGAGGAAGACTACGATGAG
GCGGACCAGGAAGATGGCCAGAACGGCGAAGACGTCGACATGCCACTGGG
CATGCATGCAGCCCAGATGGCGGCTCAACAGTCCGTTGCCAACAACGCCA
ACACCACGGAGGCACGGCCAAAGCCACCCCTCCTCTGTCAATACTGTGAT
CTTGGGTTCACTCTGCCCGCCGAGTGTCAAGAGCACCCCCCCCGCTGCAC
ACGATCCCAACGCACCGTACTGCTGCAACTTTTGCAACATCAAGCTGGTT
ACCCGGCCTGCTTTGATTTCGCACATAAAGACACTGCATGATCCCGCCCC
GTCCGTATGTGTGTGCTCACTGTCGGAAGGGTTTTGTGCGCCGCTCCGAT
CTTAAAAAGCACACAATCGTGCACACTGGCGTGAGGCCCTTTCACATGCA
ACGTTTGCTCCAAGAGTTTCTCGCCGCAATACAAATCTGACCAAGCAACA
TGCGCATTCATAGCGGTGTCAAGCCCTTTGTTTGCCAGCAGTGTCCGCGA
TCCTCAGAACGCCTGGTGGAAATGATGCGCCAACCACCGTTCGCACCGAG
ACAGCTTACAGCGCCATTCCAA
FMO10276.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fu2-RB | 2149 | CG9233-RB | 123..1159 | 9..1051 | 4670 | 97 | Plus |
| fu2-RA | 1984 | CG9233-RA | 123..1159 | 9..1051 | 4670 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8464830..8465658 | 171..1004 | 3665 | 97.4 | Plus |
| 2L | 23513712 | 2L | 8464610..8464774 | 9..173 | 825 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:00:55 has no hits.
FMO10276.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:12 Download gff for
FMO10276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu2-RA | 119..1157 | 6..1051 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:05 Download gff for
FMO10276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu2-RA | 121..1159 | 6..1051 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:12 Download gff for
FMO10276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fu2-RA | 121..1159 | 6..1051 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:12 Download gff for
FMO10276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8464608..8464774 | 6..173 | 99 | -> | Plus |
| 2L | 8464833..8465704 | 174..1051 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:05 Download gff for
FMO10276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8464608..8464774 | 6..173 | 99 | -> | Plus |
| arm_2L | 8464833..8465704 | 174..1051 | 96 | | Plus |
