FMO10282.5prime Sequence
1024 bp (665 high quality bases) assembled on 2010-11-11
> FMO10282.5prime
CAGTCGACATGATTCCCTGCGTGAGTTTGGCCGAAACGAGCGTCATTGGC
AACATGAAGGAGCGGGTCAAGGAAATGAAGGTGTTCGGCTGCCGACTCAA
CTTCTGGAACCACATTGGTCACAGCCTGACCAGTTCCAAAACCAAAGAAG
GCAACGGCAGTTCTCCAGCCCAGAATTCAACGCGCAGCATCAGTCCCAAC
AGCTCCACGACCAACAGTCAGTTTAGCTTGCAGCACAACAGCTCGGGGAG
TCTCGGCGGAGGAGTGGGCGGCGGATTGGGAGGCGGAGGCAGCCTTGGCC
TAGGCGGCGGAGGAGGAGGTGGCGGCAGTTGCACGCCCACATCGCTACAG
CCTCAGTCCTCGCTGACAACTATTAAGCAGTCCCCAACTCTATTGAACGG
CAACGGAACTCTATTGGATGCCAATATGCCTGGCGGTATACCCACTCCCA
CCCCACCAAATTCCAAAGCCAAGGACAACTCCCACTTTGTCAAGCTGGTG
GTGGCTCTCTATCCATTCAAGGCCATCGAAGGCGGCGATTTATCGCTGGA
AAAGAATGCCGAATACGAAGTGATAGATGACTCACAAGAGCACTGGTGGA
AGGTCAACCATGTCTTGTGGAATGTCGGCTATATACCCAGCAACTATGTC
AAGCCGAACGCTCCCCCCGTTTTGTATTGCTATGAATGGTATGTGGGCGA
CATGTCACGACAGACAGCCGAATCGCTGCTGAAGCAAGGTGATAAGGAGG
GCTGCTTTGTGGCCGCCTATTCATCTATCTAAGGGTCTCTACACACTATC
GCTGCATACCAAAGTTCCACAGTCGCATGTGAAGCACTACCACATCAAGC
AAAATGCTCGCTGCGAGTATTATTTGAGTGCCACCAATTGATTGATAAAA
TAATTCCCGATCTGATTAACTACCATCGCACAACTCTGGGGGTTTGGCTT
GCCGACTCAAATCTCGCCCTGCGATCGCCCAGTTCACCGACGGCCGGGAA
CTTGTACCACGACAAATGGGTAGA
FMO10282.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Btk29A-RF | 4992 | CG8049-RF | 2148..3156 | 9..1020 | 4245 | 95.1 | Plus |
Btk29A-RA | 4026 | CG8049-RA | 432..1440 | 9..1020 | 4245 | 95.1 | Plus |
Btk29A-RC | 3279 | CG8049-RC | 435..1443 | 9..1020 | 4245 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8262475..8262682 | 356..149 | 1040 | 100 | Minus |
2L | 23513712 | 2L | 8271935..8272077 | 151..9 | 715 | 100 | Minus |
2L | 23513712 | 2L | 8261479..8261681 | 1020..816 | 535 | 89.4 | Minus |
2L | 23513712 | 2L | 8262284..8262404 | 474..354 | 515 | 95 | Minus |
2L | 23513712 | 2L | 8261965..8262075 | 663..553 | 480 | 95.5 | Minus |
2L | 23513712 | 2L | 8261740..8261868 | 815..686 | 465 | 92.3 | Minus |
2L | 23513712 | 2L | 8262139..8262221 | 554..472 | 415 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 17:01:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6812..6934 | 122..252 | 112 | 63.7 | Plus |
FMO10282.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:15 Download gff for
FMO10282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Btk29A-RF | 2211..3221 | 9..1023 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:15 Download gff for
FMO10282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Btk29A-RC | 435..1445 | 9..1023 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:20 Download gff for
FMO10282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Btk29A-RC | 435..1445 | 9..1023 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:20 Download gff for
FMO10282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8261973..8262073 | 555..655 | 96 | <- | Minus |
2L | 8262139..8262219 | 474..554 | 100 | <- | Minus |
2L | 8262285..8262401 | 357..473 | 94 | <- | Minus |
2L | 8262475..8262680 | 151..356 | 100 | <- | Minus |
2L | 8271936..8272077 | 9..150 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:15 Download gff for
FMO10282.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8271936..8272077 | 9..150 | 100 | | Minus |
arm_2L | 8261973..8262073 | 555..655 | 96 | <- | Minus |
arm_2L | 8262139..8262219 | 474..554 | 100 | <- | Minus |
arm_2L | 8262285..8262401 | 357..473 | 94 | <- | Minus |
arm_2L | 8262475..8262680 | 151..356 | 100 | <- | Minus |