FMO10284.5prime Sequence
983 bp (597 high quality bases) assembled on 2010-11-11
> FMO10284.5prime
CAGTCGACATGCCCACGGAAAGCTCATCCAGCGAGATCTCCGGCGGAGGA
GGCGGTGCGATACCCATGCTGCGACCTTCCCGGATGGATCAGTTCATGAA
CTCGATGGCGGCGGCAGCGGCGGCGGTGGGTGGTGGCGGTCTTCCTGGTG
CGGCGGATAGGAACGGCGGATCCGGAGGATCGGATGGTGGCTCCCAGAAT
GGCAACGGCGATTCGCGCAACTCATCGGCCAGCCGGATCTCAGCGTATGA
AACACAGCTGGCCTATCAGCAGCATTTGGCCGGACTGCATGGTCCGCCGC
CACCGCCACCACCATCGCATCATCGCGAGATCTCTGCCTTTGTGCCGGTT
CTGCCCACCGGAAAGTTGCTCCCGGGTAGTAATTCCAATTACGAAATCAT
TGCCATGATGGCGGACAAGCGAAAGGAGTTGGCCCTAAGGGAGGCCACTG
CGGCGGCGGCAATGTTAGGACGAGGTCCTGGAGGACCCGGCGGTCCTGGT
GTGCCACCGCCTGGAGTGTTGTACGGACCAGCTGGCGTGCCACCTCCGCC
ATATCTCACCGGACCGGGTCCATCGCCCACGGGAGCCGGAAGTTCTCCCA
CTACCATCTAGAGCCGCCGCCGCAGCTCTATTTCCACCTGGCCTGGGTCC
TGCACCCCTTGTTTTTTTTTTATAGGCGCCTGCTACGTGCTCCTGGTCCC
GCATCGCCCCCTACAAATCATTTCATCTGCAAGTTCTGCAATCGACAATT
CCCCCATATCTTATATTCTGCTCATCCACGACAGGACACACACGGACGAG
CGGCCCTATTCCTGTGATATCTGCGGCAAGGCGTTCCGGCGACAGGATCA
CCTGAGGGATCACCGAAATATTATATTACTTTAGTCAAACCCTTCAAATG
CACGGAATGCGGCAAGGGATTCTGCCATCGAGAACTTGGCTGTCCACAGA
TCCTGCACATGGAGGATCACCCCACCAACTGCC
FMO10284.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bowl-RH | 3435 | CG10021-RH | 364..1329 | 9..975 | 3910 | 94.1 | Plus |
| bowl-RG | 3394 | CG10021-RG | 323..1288 | 9..975 | 3910 | 94.1 | Plus |
| bowl-RF | 3507 | CG10021-RF | 436..1401 | 9..975 | 3910 | 94.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3779726..3780577 | 9..863 | 3570 | 95.3 | Plus |
| 2L | 23513712 | 2L | 3578858..3578997 | 862..722 | 310 | 83 | Minus |
| 2L | 23513712 | 2L | 3605373..3605515 | 865..722 | 310 | 82.6 | Minus |
| 2L | 23513712 | 2L | 3781923..3782005 | 887..966 | 265 | 96.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:01:17 has no hits.
FMO10284.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:16 Download gff for
FMO10284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bowl-RD | 552..1531 | 1..983 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:18 Download gff for
FMO10284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bowl-RF | 429..1408 | 1..983 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:22 Download gff for
FMO10284.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bowl-RF | 429..1408 | 1..983 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-26 17:44:22 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 01:14:18 has no hits.
