FMO10285.5prime Sequence
1074 bp (854 high quality bases) assembled on 2010-11-11
> FMO10285.5prime
CAGTCGACATGTCGCTGTTACTAACGTTGATCGCACTTCTAGTGTCACTG
CTTTTGTTCATGGCCCGCCGACGTCATGGATACTGGCAGAGGCGGGGTAT
TCCGCACGATGTGCCCCATCCAATATACGGAAACATGAAGGACTGGCCCA
AGAAGCGACACATTGCGATGATCTTCCGGGACTACTATACAAAGTACAAA
CGTTCCGTTTATCCGTTTGCCGGGTTCTACTTCTTTTTCACCCGGTCTGC
TGTCATCACCGACTTGGAATTGGTCAAGAGGGTGCTGATCAAGGACTTCA
ATCACTTTGAGAATCGAGGAATTTTCTACAATGAGATCGATGATCCGCTG
TCGGCCACCTTGTTCAGCATCGAGGGTCAGAAGTGGCGTCATCTGAGGCA
CAAACTGACACCCACTTTTACGTCCGGCAAAATGAAGAACATGTTTCCGA
TTATTGTGAAGGTTGGGGAGGAAATGGAGAAGATTTTCAGTGCTAAAACC
ACCACAGGTGAAGGTCAAGTTCTGGAAATTGTGGATCTGGTGGCTCGATA
TACGGCTGACGTAATCGGTAATTGCGCCTTCGGTTTAAATTGCAATACCC
CTGCAAAACCCGAATGCAGAGTTTGTGACAATCGGAAAAAGGGCGATCAT
ACCCCCCTCCTTATGGAGGACTATTGGATTTCCTGATATTCGGATTTCCC
AAACTTTCCCGCCGCCTGCGGCTTAAACTAAACGTGCAGGATGTTGAGGA
CTCTCACACTAGCATTGTTAGGAATACTATCGACTACCGATTGAGGACCA
ACGAGAAGCGTCACGACTTCATGGACAGTTTAATCGAAATGTACGAGAAG
GAGCACGCCGCAACCCCTGAGGATGGTCTGTCCTTCACGAGATCTTGGCA
CAAGGCCTTTATTTCTTTGTGGCTGGCTTCGAGACCAGCTCGACGACCAT
GGGATTTGCCCTGTACGAGCTCGCCCTTCGATCAAGATAATCATGATCAC
TTAGGGCCGAAATCACATGTCTGAGCAACACACACGAGTTACTACGAGGA
TCAGAAAATCAGCAATTCTGGGAG
FMO10285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a23-RA | 1761 | CG10242-RA | 33..1059 | 9..1034 | 4585 | 97 | Plus |
| Cyp6a17-RB | 1727 | CG10241-RB | 61..990 | 45..975 | 1575 | 78.7 | Plus |
| Cyp6a17-RA | 1546 | CG10241-RA | 61..990 | 45..975 | 1575 | 78.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14875861..14876866 | 9..1015 | 4420 | 97 | Plus |
| 2R | 25286936 | 2R | 14874013..14874942 | 45..975 | 1435 | 77.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:01:20 has no hits.
FMO10285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:16 Download gff for
FMO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a23-RA | 29..1034 | 9..1015 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:20 Download gff for
FMO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a23-RA | 33..1038 | 9..1015 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:23 Download gff for
FMO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a23-RA | 33..1038 | 9..1015 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:23 Download gff for
FMO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14875861..14876866 | 9..1015 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:20 Download gff for
FMO10285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10763366..10764371 | 9..1015 | 97 | | Plus |
