Clone FMO10289 Report

Search the DGRC for FMO10289

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:102
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG12424-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10289.5prime Sequence

986 bp (670 high quality bases) assembled on 2010-11-11

> FMO10289.5prime
CAGTCGACATGCATCGTTCGCTGAAGCCGCATGCATCCACCGCACAGGCT
AAGAAGGTGCAACCGCCAACGATACCAGGCGACTCGCCGCAGGATTTGCA
TCTCTATCAGCAGCCGCAGCAGCTTCACCACCACCACCATCAACACCCAA
ACCATCATCATCCGCACCACCAGCCATCGATACCGCTCTATCGGCTAAGC
GGACCACTGCGCCATCATCAAAACCACCAGGCGGACGATGGGATCAGCAT
GAGCGGCAGCAGCATCGTTTCGTCGCCCTCGCTGGAGGAGGGTGGCTTCA
ATTTGCCGCGGGAGACGAGTGTGGCCCTGCGTCTTAAGGATGAAGTGGGT
GGCACTTCAACGGCAGCCCCAACCACTGGCGGCCCAGGAGGAGGTGGAGC
GACGGTGGTGGGAGCACCACCACCCGGTGCCGGAAAGCCCGGCGTAGCCA
TGGATCCACCGCCACCCGTTTTCTGTGCCACTTTGCGCGAACCGCTGACC
CACAAAGCGGCCGTCTACTACCACCAACAGCTGGCCCTGCAGGAGGATCC
CGGCATCGATCTAACCCAATCGCCTGGCCGAGACTCGCCGGGCTCGTCGT
CGGGCTCCCCCCCCCCCTTTATTTCGTCACAGCACCGCCAGCTTGGACTC
GGGTCGGGCCTCCTCCCCCCCCGACCAGCGTGTTCTCTTCGGGCGCCTCG
ATTCGTGCTCCGCTCTCTCGCCGCGCTGCACTTCCGTCATCTCGTGTTCT
ATTGGCAGGTGGATCGGCCCCGCACCAATTATTTTATCTTCTACTGGCTG
CTCCAGATGAAGCACGAGGAGTACGCGCAGCTGTTCATCGCCGCGGGCTA
TGATCTGCCCACCATTGCGCGCATGACGCGGACGATCTCACGCCATGGTA
TAAGAATCCACCATCCATCCGGGAGCGATCAGCAGCGGATCGACAAGCTG
CAGTGCTCGACAATTTGCCGCATTTCGTGCGGGATC

FMO10289.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:33
Subject Length Description Subject Range Query Range Score Percent Strand
ckn-RE 4568 CG12424-RE 683..1666 8..986 4015 94.7 Plus
ckn-RD 4120 CG12424-RD 683..1666 8..986 4015 94.7 Plus
ckn-RB 4039 CG12424-RB 365..1348 8..986 4015 94.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14971778..14972754 8..980 3685 94.1 Plus
Blast to na_te.dros performed on 2014-11-26 17:01:32 has no hits.

FMO10289.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:19 Download gff for FMO10289.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12424-RB 363..1352 1..986 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:28 Download gff for FMO10289.5prime
Subject Subject Range Query Range Percent Splice Strand
ckn-RC 677..1666 1..986 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:30 Download gff for FMO10289.5prime
Subject Subject Range Query Range Percent Splice Strand
ckn-RB 359..1348 1..986 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:30 Download gff for FMO10289.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14971772..14972758 1..986 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:28 Download gff for FMO10289.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10859277..10860263 1..986 94   Plus