FMO10289.5prime Sequence
986 bp (670 high quality bases) assembled on 2010-11-11
> FMO10289.5prime
CAGTCGACATGCATCGTTCGCTGAAGCCGCATGCATCCACCGCACAGGCT
AAGAAGGTGCAACCGCCAACGATACCAGGCGACTCGCCGCAGGATTTGCA
TCTCTATCAGCAGCCGCAGCAGCTTCACCACCACCACCATCAACACCCAA
ACCATCATCATCCGCACCACCAGCCATCGATACCGCTCTATCGGCTAAGC
GGACCACTGCGCCATCATCAAAACCACCAGGCGGACGATGGGATCAGCAT
GAGCGGCAGCAGCATCGTTTCGTCGCCCTCGCTGGAGGAGGGTGGCTTCA
ATTTGCCGCGGGAGACGAGTGTGGCCCTGCGTCTTAAGGATGAAGTGGGT
GGCACTTCAACGGCAGCCCCAACCACTGGCGGCCCAGGAGGAGGTGGAGC
GACGGTGGTGGGAGCACCACCACCCGGTGCCGGAAAGCCCGGCGTAGCCA
TGGATCCACCGCCACCCGTTTTCTGTGCCACTTTGCGCGAACCGCTGACC
CACAAAGCGGCCGTCTACTACCACCAACAGCTGGCCCTGCAGGAGGATCC
CGGCATCGATCTAACCCAATCGCCTGGCCGAGACTCGCCGGGCTCGTCGT
CGGGCTCCCCCCCCCCCTTTATTTCGTCACAGCACCGCCAGCTTGGACTC
GGGTCGGGCCTCCTCCCCCCCCGACCAGCGTGTTCTCTTCGGGCGCCTCG
ATTCGTGCTCCGCTCTCTCGCCGCGCTGCACTTCCGTCATCTCGTGTTCT
ATTGGCAGGTGGATCGGCCCCGCACCAATTATTTTATCTTCTACTGGCTG
CTCCAGATGAAGCACGAGGAGTACGCGCAGCTGTTCATCGCCGCGGGCTA
TGATCTGCCCACCATTGCGCGCATGACGCGGACGATCTCACGCCATGGTA
TAAGAATCCACCATCCATCCGGGAGCGATCAGCAGCGGATCGACAAGCTG
CAGTGCTCGACAATTTGCCGCATTTCGTGCGGGATC
FMO10289.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ckn-RE | 4568 | CG12424-RE | 683..1666 | 8..986 | 4015 | 94.7 | Plus |
ckn-RD | 4120 | CG12424-RD | 683..1666 | 8..986 | 4015 | 94.7 | Plus |
ckn-RB | 4039 | CG12424-RB | 365..1348 | 8..986 | 4015 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14971778..14972754 | 8..980 | 3685 | 94.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:01:32 has no hits.
FMO10289.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:19 Download gff for
FMO10289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12424-RB | 363..1352 | 1..986 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:28 Download gff for
FMO10289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ckn-RC | 677..1666 | 1..986 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:30 Download gff for
FMO10289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ckn-RB | 359..1348 | 1..986 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:30 Download gff for
FMO10289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14971772..14972758 | 1..986 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:28 Download gff for
FMO10289.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10859277..10860263 | 1..986 | 94 | | Plus |