FMO10290.5prime Sequence
902 bp (616 high quality bases) assembled on 2010-11-11
> FMO10290.5prime
CAGTCGACATGGGTTGGTGGAGCAAGAAAAGCGAGACGGATCGCAGTCAG
CCCAGCCAGGAACTGGTGGCGCAGGACCCGCGCACACGAGTCCAGACTAC
GAGTGCAGCCACGGAGACGACCAACACAGCCGTGCAAAACTCGACCATAA
CGGACAACAACAAGCAGACGGTTACCTTTCTCACCACCCGCCAGACGGTG
ACGCACACGCAGCGGGCGCTGATCACGGAGACGACAACGCGACGCACGCC
TAGTCAGGCGGAGTTAGAGGCTCTCTTCGCAAAGATAAAGATGGGCGGTG
AGGGACCCATTGGCTCCACCACCACCACTACGACGACCACCTCCTCGCGC
TCCCGACCGCCCAGTTTGAACGGCGTCTCCTTTCGCTCCACACAACCCTT
CAAAGCCACGGCAAGCAATGCTGGCAAACGGTCAAGCACCTTAGTCAAGA
CCGAGCAGCACACAGTGACCCAAAAGAATGGGCGCACGGTCACCCAGCCC
CTGGAGACTCATAGAGTGGACCTCAAGGGAAGTCGACCTAAGGCGACCTG
GGCGTCATTTGCGTCCACTGCAAACAGCTCAACATCCAGCTACGTCTCAC
CTTATCGTCAGAAGCCAACCCCCCCCTCTTTCTTGCACATCTCCCAACAT
CAAGACACCAAAAACCACTAGCTCCACCCCCCCCCCCCAGTGCCAGCTCC
ATTACCACTCCGCCCAAACCATCATCATCTGTATCCTCCATTTCAAGCAT
TTTCATTTCTGCTTTCAAGCAGTTGACTAGCCGCCCCGACTTTTCTGTAT
ACTTTCAATGACTTCATTAGTCTGGGATCGTCAGAGGCACCAAGCCGAAG
TCACTGCCGTCGCGCAATCCCAAGATGCCCAGGGCACGATTTCACGACGC
CT
FMO10290.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Strica-RB | 2720 | CG7863-RB | 103..987 | 9..894 | 3700 | 95.1 | Plus |
| Strica-RA | 2163 | CG7863-RA | 103..987 | 9..894 | 3700 | 95.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6022158..6023042 | 894..9 | 3530 | 94.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:01:35 has no hits.
FMO10290.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:19 Download gff for
FMO10290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dream-RA | 157..909 | 1..755 | 96 | == | Plus |
| dream-RA | 965..1057 | 812..902 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:31 Download gff for
FMO10290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dream-RA | 95..847 | 1..755 | 96 | == | Plus |
| dream-RA | 903..995 | 812..902 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:31 Download gff for
FMO10290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Strica-RA | 95..847 | 1..755 | 96 | == | Plus |
| Strica-RA | 903..995 | 812..902 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:31 Download gff for
FMO10290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6022150..6022242 | 812..902 | 95 | == | Minus |
| 2R | 6022298..6023049 | 1..755 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:31 Download gff for
FMO10290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1909655..1909747 | 812..902 | 95 | == | Minus |
| arm_2R | 1909803..1910554 | 1..755 | 96 | | Minus |
