FMO10294.5prime Sequence
1023 bp (668 high quality bases) assembled on 2010-11-11
> FMO10294.5prime
CAGTCGACATGTATCACTTTGTATCCGAGCAAACGCCGGAGGTGCGGCTC
ACAGATGAGGCACTGGTCACGAGCCACGTGACGCAGTACCTCAAGAGCTT
TCAACTGGATGCCGTCCGCTTCGTCTACGATCGTTTGGCTAAGCGGGAAT
TCTGCATCCTGAATGATGAGAGTGGCCTTGGAAAGGTCGCTACGGTGGCG
GCACTTCTAAGTGCCCTACCACCCGCCAAAAAAACACTTGTGGTGCTCCA
GAACGATGAGCAACTGCTCACCGGTTGGCGATTCCATTTGGACACTCTCA
CTGACCTCCAGGTGTACATCATTCAGGGGGTGCAAGATACCACCGACTCC
CCGCACAGCGTTTACCTGGCGAAATGGAGCCAACTACGGAGCATTGGAGA
TCTCAGTCGCCTCAAGTTCGACTACATTATGGTGGATAATCGGGGGCATT
CGCCGACCAACAGCTTTTGCACTTCCATGCTGCTGAAGCAATTCGAGGGA
CGGGTAAACGTTCTTATCTCCAGTGTTGACGTTACGTCCGACGTTAGGTT
GCTCTACAATGTTCTACGGTTGGGCGGCCGACTGGAGCATCAGTACAAAA
GCTTTGCCACCTACCATCTTAAAATTCCATCTGCCAGATCCGAAGGAGGT
ATTCAGTAAGCGCCCCCCCCCCCCCAGATTATATTTATTTATCGGGGATT
CCTCAGCGAGTACATCAAGGACTTTCGTCTGCGTCGTTTTCGTCATCAAT
TCGACAAGTCACTGCCACTTGCCCCCATTTTATTTATATAAACACAATCT
GAATCTCTGGTTGGCCTCAAAGAACAGCCAGAGCACAATAAGCGGCTCAG
ATGTGTGCTCTACAATCGCTTCCATAGACAACACTCCCGGCCCAGAAAAA
AAAAACAGAACTCCTCCGAAGAACGGATAGGTATCCGAGCACAGCGTGGA
TGATGTGGCCATGTCACCGCTGATATTCGAGTATTCCGAGTCTGACGATG
ACCCCCCTACCAGTAGAACTTGA
FMO10294.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SuUR-RA | 3776 | CG7869-RA | 404..1414 | 8..1023 | 4145 | 94.4 | Plus |
CG45101-RA | 3776 | CG45101-RA | 404..1414 | 8..1023 | 4145 | 94.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11065394..11065722 | 8..336 | 1645 | 100 | Plus |
3L | 28110227 | 3L | 11065828..11066029 | 335..536 | 980 | 99 | Plus |
3L | 28110227 | 3L | 11066361..11066663 | 719..1023 | 925 | 89.9 | Plus |
3L | 28110227 | 3L | 11066095..11066221 | 536..663 | 515 | 95.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:01:43 has no hits.
FMO10294.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:14:21 Download gff for
FMO10294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SuUR-RA | 392..1407 | 1..1022 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:14:38 Download gff for
FMO10294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SuUR-RA | 398..1413 | 1..1022 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:44:35 Download gff for
FMO10294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG45101-RA | 398..1413 | 1..1022 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:44:35 Download gff for
FMO10294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11065388..11065722 | 1..336 | 98 | -> | Plus |
3L | 11065830..11066029 | 337..536 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:14:38 Download gff for
FMO10294.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11058488..11058822 | 1..336 | 98 | -> | Plus |
arm_3L | 11058930..11059129 | 337..536 | 99 | -> | Plus |