FMO10301.5prime Sequence
663 bp (663 high quality bases) assembled on 2010-11-12
> FMO10301.5prime
CAGTCGACATGGAAGCGCCGGTGAAGGGCATTATTGGTATTCTGGCCACT
GCTGGATCGTTTTTTGCACTAGGAGCTTACTATCAGCACATCGATGTCAT
GCGAAAGATTCGACGATTGGAGCAACGAAACCCACATGCCTACTTTATCA
GAAGGAAACTGTACGCACTGCTGGGAATTTTCGCTGTGCGCCCTGATAAC
TCAGAATTCGACGTGGATACCGATGACTGCCACAAGCTGGGCGGGATCAT
GAAGTACGGCTTCCCCAGCACCAATGATATCACCATAAATGAGACCTTTG
ACTTTGTGACCTCTTTCGATCGAAGAAACTCTGCGATTCTGTGGATGTGC
GAGCGGGTAGATCTGTCCAATCGCGTCGTCTACGGGGATTCCACATCCGT
GGCTCCAGCTGGAGCATTTGGACAGTCGGAGGCAGCCAGGGTATTTTTCC
TGTCCAACATTAGGCCCTTTCTAAACAGAGGGTTCAATCTCACTGTCTGG
GATCGACTGCTGCAGTACGTCCATGAGATGAGTCAACGACATGGAACCGT
GTATGCCTACACCGGATCAATTTACTTGCCCCGGGAGCTAAAGTCGAACA
GTTGGTTCCTGGAGTTCCAGTCGGAGGAGAGAACCATGGTGGCCGTACCC
ACCCATTTCTTCA
FMO10301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tengl1-RA | 1108 | CG31682-RA | 92..746 | 9..663 | 3275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2239776..2240269 | 663..170 | 2470 | 100 | Minus |
2L | 23513712 | 2L | 2240341..2240502 | 170..9 | 810 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:10:12 has no hits.
FMO10301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:00 Download gff for
FMO10301.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31682-RA | 87..745 | 1..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:53 Download gff for
FMO10301.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tengl1-RA | 87..745 | 1..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:57 Download gff for
FMO10301.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tengl1-RA | 87..745 | 1..662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:57 Download gff for
FMO10301.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2239777..2240268 | 171..662 | 100 | <- | Minus |
2L | 2240341..2240506 | 1..170 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:53 Download gff for
FMO10301.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2239777..2240268 | 171..662 | 100 | <- | Minus |
arm_2L | 2240341..2240506 | 1..170 | 97 | | Minus |