FMO10302.5prime Sequence
1127 bp (1022 high quality bases) assembled on 2010-11-12
> FMO10302.5prime
CAGTCGACATGCCTCGCCTCTCGGTTTTCTGCGGATTATCGCGTAGAATC
ATCTGCTCCAGCACTGCTCACCGAAACCTTTGGCGACTGTTGTCCGACAG
TTCGGAGTCGACCATTATCCCACACGTTTCGGACAAAACGGAAAGTGTGA
AGAAATTCAAAAAGGAAACGCAGGTGGATCACACAAGTCACCTATTTGTA
TGGCCGGAGGCGAAGGACGAAAACGTTCATCATGTGAAAGAGAACAAAGA
GGATAGCAATGACGATATAACTGCATCCTGGGGCTGGAAAAATGACGAGC
TTGACGTGGAGCAATTGGCAGGACTACCAAGTCCTAATGAGGTGGAGGAT
CCATACCGGCAGCCAAACAATGAATCTCAGGATGATCAGTTGCCATTCGC
TGAAGGAGACCAATCAGGAATTCAAGAAGAATTACAATTCGCAAGAACGC
GCTCCCTGCGAGAACAGCTTGTCAAGAATCAGGCGTCCCAAGAACCTTTT
ACCAGCTTTGAGAAAACATCTCTCACATCCGTTCGAAGGAATGTGGACTT
CATGATGCAAGAGCTTAGTCAGATTTCACTTATTTTGAATACTATGGGAG
GAGGTGAAAAAACAATGGGGATGGTTAACTCTGAACCGGATGTGGCTTCC
TTTGCACTCAACCAACCCAAAATCAGTGAAAGTTTGAATCATGAGGAGGA
ATCAAATCAGTCAGTGGATAGAGCTAGTTCCCATCAATCTGAGCTAGGTG
TTGCAGATTCTATGCATTCGGAGGTAGCCAGTGCGCTCTCAGAACCATCT
GGATTGGGTGATGTAGAGAGCCTAGATCATAGCGAGATTTCGAACCAGTC
TTTTGATTCCGAACTAACGAGGGATATCACCGATCAACTTAAATTGGATC
ACGAGATGGAAGCAAATCAGTCTTTGGATTCTGAGTTAACCGGTGAAATA
ACTAATCAATCTAGTTCGGTAGTTTCAGAGTCTTCGATTTCCGATGAGGA
CTTCAGGGAGGGAGCTAATAAAAACAATCCCCACAAATCGAGCATTGCGG
TCTGCCTGGCGAATACTCAGAGTCAGTCTTCAAAAGCATGAGAATACTCT
CAGGACTGATGAACCGCCAGGAACCTC
FMO10302.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-RB | 2691 | CG30365-RB | 1233..2340 | 7..1112 | 5165 | 98.3 | Plus |
| spaw-RA | 1552 | CG30365-RA | 94..1201 | 7..1112 | 5165 | 98.3 | Plus |
| hubl-RB | 2691 | CG30364-RB | 1233..2340 | 7..1112 | 5165 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8359909..8360924 | 1023..7 | 5020 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:10:15 has no hits.
FMO10302.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:00 Download gff for
FMO10302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30365-RA | 267..1388 | 7..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:56 Download gff for
FMO10302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spaw-RA | 94..1215 | 7..1127 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:59 Download gff for
FMO10302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hubl-RB | 1233..2354 | 7..1127 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:59 Download gff for
FMO10302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8359803..8360924 | 7..1127 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:56 Download gff for
FMO10302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4247308..4248429 | 7..1127 | 97 | | Minus |
