FMO10304.5prime Sequence
824 bp (824 high quality bases) assembled on 2010-11-12
> FMO10304.5prime
CAGTCGACATGCGCATGCTTTTTATGATTTTCACAATAGCCGAGCGAAGT
TTCAAGATTCTAGAACTACCCACCACACCAACGCTTCTGCTGCGCCGCCA
GTCCCACAACTACGGCTACGACTACATCAGCCCCACGCACATCGAACTCA
GCCGGGAAGCAACTCGCCTGGTAATTCGCCGTCTGCAGCGCACCGTTCTC
CGCCTGATCCGTGACCCGGACTTCATCATGTCTGCCGAGGCGAATCCCGA
GATGGATAAGGAGCACCACGAGTCCCCATTCGCAGCGAACCGCAAGGCCG
GTGCCAGCGGCGCCGGCAAACAGGACTCGAACTGCCGCACCTGCAACGAT
TTCAAGTCGTGGTCCAAGCAGCAACGCCTCATCTCCAACGTGCAGAGCGC
CAAGGTGAAGCACATGGCCGCCGCCGAAAAGCTGACCGTCAACGCCGCCG
AAGATCCGCTGCCCCGCGACGACTGCCCGCTGGACAAGGTGAGGCTGGGA
ATTTCCACCTGGGGACTGCTCCACACCATGGCCGCCTTTTACTCGGACAA
CCCCACGGACACCGAGAAGCGCGACATGAAGACCTTTTTTGAGGTTCTGT
CGCGCCTTTACCCCTGCGAGTTTTGCGCCAAGGACTTTCGCACCGACCTG
GACGTCAACCCCATCAATGTGAACTCCCAAAAGGAGCTAGCACTGTGGCT
GTGCAAGTTCCACAACCGAGTGAACGACAAACTGGGCAAACCGCTCTTCG
ATTGCACCAAGGTGAACGAGAGGTGGCGCGACGGCTGGCTAGACGGCTCC
TGCGACGCAAGCTTTCTAGACCAT
FMO10304.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-RB | 1362 | CG12534-RB | 245..1043 | 8..806 | 3995 | 100 | Plus |
Alr-RA | 1107 | CG12534-RA | 1..788 | 19..806 | 3940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19748912..19749312 | 8..408 | 2005 | 100 | Plus |
X | 23542271 | X | 19749386..19749629 | 403..646 | 1220 | 100 | Plus |
X | 23542271 | X | 19749689..19749848 | 647..806 | 800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:10:22 has no hits.
FMO10304.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:01 Download gff for
FMO10304.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12534-RA | 1..797 | 15..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:00 Download gff for
FMO10304.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RB | 171..978 | 1..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:03 Download gff for
FMO10304.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RB | 241..1048 | 1..812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:03 Download gff for
FMO10304.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19748908..19749308 | 1..404 | 99 | -> | Plus |
X | 19749388..19749629 | 405..646 | 100 | -> | Plus |
X | 19749689..19749853 | 647..812 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:00 Download gff for
FMO10304.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19642941..19643341 | 1..404 | 99 | -> | Plus |
arm_X | 19643421..19643662 | 405..646 | 100 | -> | Plus |
arm_X | 19643722..19643886 | 647..812 | 98 | | Plus |