FMO10305.5prime Sequence
1037 bp (1037 high quality bases) assembled on 2010-11-12
> FMO10305.5prime
CAGTCGACATGGAAATGCGCGATCGGCTGTACCAAATGATGGTGAGCCAG
AGCTTTATGTCGAGAGGCACGGTGACCGCGAGCATGGCCAATTTTGCGAT
TGGAAATCTTAGAAGTTCCGATGCTGTAGAAAAGAGAGTGATCAAAATTC
TGCTGGTGATCGAGGAGAAGTATCGGAGTTACTTTGACAGCTATAGGAAG
GAGCTAGAGCTCCAGAGGATAGCGGCAGAAACACTGCACCAGCTAATCCA
GCGCTACAAGATCACCATGCAGCTGGACACCAGCTGCACATGTCCGCAGA
TCTATGATATCGAATCGGATGATGCGATCATCAACAAGTTCTACATCCAC
TATCAGGTGATAGCCAGTTCAAACAAGAATCAGTGTTGGGCCATCCAAAG
CCTGCGTCCGTATGTGCTTGTCTTTCGCCGTGAATGTGCCAAGTTGAATA
GGAGCGAGGAGAGCCCCTTCATTCTGGGCGATGCCTTCCACAAGCCCATT
CAGTTCTTTATCGACCTGGTGGAGGAGCTGTTCGCCTACTTCTACAGTGG
ACACCTTCAGCTGGACTGCGCGGCGCGTCTGTTGGATCCCTTGGATCTGT
ACCGAATGGAGTGCTACATGAAGCTATTGGAGCCCAACGAGGACTTTGCC
GAATACTTTCTGCACAACATAAGCTTCTGCAAATGCATGCGGCCGCCACC
GATGTGTCCGCCGTACGAACACCATCAGAAGATCAAGGATCAGTCCGACG
CATATCTCAGTCATGCCAAGAAGAAGCGATGTGCCAGGCGGTTTGAGAGA
ATGGCCCAAAACGAGGCACAGACTGCGAAGCGGGAAAGCGGCTCAGTGGA
ACGGAAAATGTCCATTGGCAGCGCGAGGACGACCAGGAGTCTAAGTCGGG
AGGCTTCTGTCGTGAAGAAGCCGTATCCGTATCCATCAGCAACATGAACG
CACCCTAAGGATCAGCTGATGTGCGCCCTTAGCATTTCCCCGGAAAAAAG
GCACGACGCCAACAACAAGCAAGCTTTCTAAGACAAT
FMO10305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-RA | 1538 | CG30391-RA | 98..1108 | 9..1016 | 4935 | 99.4 | Plus |
| CG30393-RA | 1216 | CG30393-RA | 194..747 | 138..691 | 1060 | 80.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21265235..21266245 | 1016..9 | 4860 | 99.4 | Minus |
| 2R | 25286936 | 2R | 21266833..21267386 | 691..138 | 1045 | 79.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:10:25 has no hits.
FMO10305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:02 Download gff for
FMO10305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 89..1111 | 1..1022 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:02 Download gff for
FMO10305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 89..1111 | 1..1022 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:06 Download gff for
FMO10305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 89..1111 | 1..1022 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:06 Download gff for
FMO10305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21265232..21266254 | 1..1022 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:02 Download gff for
FMO10305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17152737..17153759 | 1..1022 | 98 | | Minus |
