Clone FMO10306 Report

Search the DGRC for FMO10306

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:6
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG18808-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10306.5prime Sequence

1133 bp (1004 high quality bases) assembled on 2010-11-12

> FMO10306.5prime
CAGTCGACATGTTGGCGCTCCTCCGGCCAGCACTGTGGCTGGGAAGCTGC
CTTCGTGGCTATCACATGCATGCCGCCTCTACGCAGCAGCGGGGCGACAC
GTCCTTGGTTCTGGTGGATGAGGCCCGCCGCTTTATCCAGGACTGCCTGC
TACGGGTTGGAGTTTCCCCCTCCAAGGTGCGCTGCATCAGCGAGTTCCTG
GTTGTGGCGGACTATCGAGGAAACTACGGAAGCGGGCTGAATCGCCTGGA
TTACTATCTCAGTGATCTGCAGAGCGGGCATGCCAAGGTGGGCGCAGAGC
CTTCAATAATCAGTGAAACGGTGTCCACCGCCCATGTAAATGGCAATTCC
GCCTTGGGTGTGTTTGTGGGAAACTTTTGTATGGATTTGGCGGTGAAGAA
AGCTGAAGACTCTGGCATCGGTTTCGTAGTGGCCCAGCAATCTCACGACA
TTGGCATGGCCAGCTGGTTTACATTTCGCGCTGCCGGCAAGGGATTAGCC
GGAATCGTGATGTCCAATTCGGCTCCAACGATGATGGGTCCCAACTCAAA
GTCTGCCAGCATTGGCTCCAACTGCTTTGCCTTCTGCGTAAAGGGTGAGG
AGTACCATTTTGTTCTAGACATGGCGACCAGCGTGAAGGATATTGGAGCC
GTGGAATGGGCTTGGGCCAACGATGAGTATATACCGCATGGCTGGGCGGC
CAACGAGGGTGGCTTATCCACCTGTTTTCCCAGCTTGGCCTTAAGGACAC
CATTACTATTTCCTGCTGGTGGTCACAAAGGCTATTGCCTGTCAGCCGTG
ATAGATATTCTATGTGGAGTGCTCTCTGGTGCCCAATATGCCACTCATAT
AACCATGGACCAGAACCAACCATCGAACTTGGGTCAAGTATTTATTGCTC
TCGATCCAGAATTTTTCTTGCCCAACTTTATGGAACGTTTCGATGACTTT
TGTGTCGCATCCAGAATAGCCAGCCGGCGGACGATTCAGAGTCCATCCGG
CTACTGCGACTGAGAGGATGCACATGAACTACGTTGAGATTGCGGCTTAG
CTATTCGATAGTCTTTTGAACAAGTAAAAGAATGGCCGAAGGCTGTGCGT
AACAATCGACTGCTTTGTATGGGTCAGTCCAGG

FMO10306.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG18808-RA 1354 CG18808-RA 79..1186 9..1102 5115 98.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4806332..4807328 1004..9 4920 99.8 Minus
Blast to na_te.dros performed on 2014-11-26 17:10:28 has no hits.

FMO10306.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:03 Download gff for FMO10306.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18808-RA 70..1188 1..1105 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:05 Download gff for FMO10306.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18808-RA 70..1188 1..1105 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:08 Download gff for FMO10306.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18808-RA 70..1188 1..1105 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:08 Download gff for FMO10306.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4806219..4807332 1..1105 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:05 Download gff for FMO10306.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4806219..4807332 1..1105 97   Minus