FMO10312.5prime Sequence
1084 bp (1068 high quality bases) assembled on 2010-11-12
> FMO10312.5prime
CAGTCGACATGAAACAAATCGTCGTGCTTTGCATATTCTCACTCTTTGCC
AAAGATGCACAAACATTGCTCCTAAGCCAAATGGATTGGAAGAATCTGCG
CAACAGTGGAGCCTTGGACCTAAATGTCTTGCGCTGCTTTTTGCGCGACA
AAAACTATTGTCCCAGTCCACATATCGATCACCGTCTGTATGCACCCAAT
GGACCGCGTCGTGGAACTCCTTTAAATGTTAAGAACCCAATAACGCTTTA
TAAAGGTGGATTTAGCAAGCACCGCGAGACTGTCTTCATAATACACGGAT
TCAATGGAACTGCCATAGATATTCACCTGCAATTCCTTCGAGATGCTTAC
CTATCCCGCGATTTCAATGTCATTACAGTGGACTGGCGACCTTTGACCCG
CTATCCATGCTACCTCCACTCGCTTATAAACACCAGGTTAACTGCGCAAT
GCACCGCCCAGATCTACGCCTTCCTCACCCACTACGGAGCTGTCCGGGAA
CGGATCACTTGCGTGGGTCACTCCCTGGGCGCCCACATCTGCGGCATGAT
CAGCAACCACCTGACGCGGAAACAGTATCGCATCATTGGATTGGATCCCG
CCCGGCCTTTAATTGAGCGCATGAAGAGCAACAAGTTTCGGTTGTCGATC
GATGATGCCAACGTCATTCAGGTGCTCCACACCAATGCCGGTTTCCTGGG
CCAGGAGGATAACTCCGGGCATCTAAACTACTGTGTCAACGGTGGACGCA
TCCAGCCGTTCTGCAAAGGAAATCCAATCAGAAAATCGCGATGTTCGCAC
TTCTTGAGCATCTGCTACTTGGCCACTGCCACATTTAAACACAATAAGTT
CATGGGAGTACCGTGTCCCAATGGCTGCCTGAATCTTAGTGGATCCAAGA
GGCTGCCAGTGAGCGGCAAAGTGAATCCCTTCGAGTTCGCCTCGCTGATA
AGGAGTACCACATAGGCAACGATGCCCCGATGACGCCCGAGCTGCATTTG
CATGATGTGCCGTATGCCAAGCACTGCCCCTTTACGGATGCGCAAGCCTT
CTAGAACAATTCGTTTGGGCGCCGCGGCCCAGGT
FMO10312.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6431-RB | 1689 | CG6431-RB | 585..1622 | 9..1042 | 5090 | 99.6 | Plus |
CG6431-RC | 1191 | CG6431-RC | 275..1124 | 197..1042 | 4150 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10727833..10728269 | 345..781 | 2185 | 100 | Plus |
2L | 23513712 | 2L | 10728352..10728550 | 781..978 | 945 | 99.5 | Plus |
2L | 23513712 | 2L | 10727605..10727753 | 197..345 | 745 | 100 | Plus |
2L | 23513712 | 2L | 10726300..10726443 | 53..196 | 720 | 100 | Plus |
2L | 23513712 | 2L | 10726099..10726144 | 9..54 | 230 | 100 | Plus |
2L | 23513712 | 2L | 10728621..10728673 | 991..1042 | 215 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:10:09 has no hits.
FMO10312.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:59 Download gff for
FMO10312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6431-RB | 560..1600 | 9..1046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:51 Download gff for
FMO10312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6431-RB | 585..1622 | 9..1042 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:56 Download gff for
FMO10312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6431-RB | 585..1622 | 9..1042 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:56 Download gff for
FMO10312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10726099..10726144 | 9..54 | 100 | -> | Plus |
2L | 10726302..10726443 | 55..196 | 100 | -> | Plus |
2L | 10727605..10727753 | 197..345 | 100 | -> | Plus |
2L | 10727834..10728268 | 346..780 | 100 | -> | Plus |
2L | 10728352..10728556 | 781..983 | 99 | -> | Plus |
2L | 10728613..10728673 | 984..1042 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:51 Download gff for
FMO10312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10726099..10726144 | 9..54 | 100 | -> | Plus |
arm_2L | 10726302..10726443 | 55..196 | 100 | -> | Plus |
arm_2L | 10727605..10727753 | 197..345 | 100 | -> | Plus |
arm_2L | 10727834..10728268 | 346..780 | 100 | -> | Plus |
arm_2L | 10728352..10728556 | 781..983 | 99 | -> | Plus |
arm_2L | 10728613..10728673 | 984..1042 | 96 | | Plus |