Clone FMO10315 Report

Search the DGRC for FMO10315

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:15
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14106-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10315.5prime Sequence

1122 bp (1031 high quality bases) assembled on 2010-11-12

> FMO10315.5prime
CAGTCGACATGAAACGGGCTTCGATGGGCACATCACGCAACTTTCTCCGC
GAGAACCGGATGATGGTGAGCCAGGCGTCTCCAAACTACCAGATGCCCAC
CGCCTCGTCCATGGCCAGATGCTGCGGACCAGTGAGGTTACTTTTGGCCG
CTACTCAGAGGGGCTTGAATGGCGGAACAGGGCCAAAAGTTGTTCCCAGT
CAACGGAAGCTATCCGAGAAGCAGATTCAAACGGAGGACATCAGCGATGA
GCGGTTTCTCAGTGCCGCCCTGCTCAAGTGCTCGGAGAAGACTCATACCC
ACTTGCAATCCCGCAGCGAGGGCGACGATCCTGCGGACGGCAGGGGAGGA
CAGTTTCTGGACGAAAGGCTACGACTGCGACGGACTGCGTCCAATTTTGA
GTTGGGCAAAATGCCGGAACAACGCGATGGCTATCAGCCGGGGCAATGCA
CAATGCACCGGCCGTTAGCTAACACGTTCGGCATTTTGCCCGGCGGTTTA
AATTACCTGGACAATTGTGTCTCTTCCAGCCGAAAACAGGATGATGAGGC
ATCGATCTGCTCGCAATCCATCAAGGCAAGTTCTCCAAGGGTCCGCCAAA
TGGACATTCCCGAGGTGGTGGATGTTAACCCAGACGATATACTAAGCTTA
CACTCGCAAGAGTCCTGTGCAGAGCTACCAGTTGTAGAGGTCCAGCGGAA
TGAAGCGGAGTCCAACTACCGGAGAATTCTCAAACGGATTCACCTGAGGA
ATCCCAACCTATTCTGCTAACCAGTGAGCAGAGAATGGTGCTAATGGATG
CCGTCCGTAAGCGGCAAAATCAATTGATTGCGGAATACAACCGATTGCCA
CTTACCGTGGGCACATTGCGAGTCCGGAATCTCAAGAGACAACTGGAGCA
GCAATTGGATGTGTTGGACTACGATCTCAGCAGCTATCACTGACGATGTG
TATTTGAAGCCAGAGTCACAATTTGGACATCGCTTATCAAAATTGCCAAC
AAATATAATGCTGCAGCTTTCTAGAACCATTCGTTTGGCCGCCGGGCCAG
GTAGTGGTCATATCATATCTAGTCGTAATCATAATCCACTAGGCCTAAGG
AGATCTGTCATGAACTATGGCT

FMO10315.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14106-RA 1101 CG14106-RA 79..1085 8..1008 4885 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13424587..13425593 1008..8 4755 99.3 Minus
Blast to na_te.dros performed on 2014-11-26 17:10:52 has no hits.

FMO10315.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:07 Download gff for FMO10315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 70..1092 1..1018 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:24 Download gff for FMO10315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 73..1095 1..1018 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:25 Download gff for FMO10315.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14106-RA 73..1095 1..1018 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:25 Download gff for FMO10315.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13424584..13425599 1..1011 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:24 Download gff for FMO10315.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13417684..13418699 1..1011 98   Minus