FMO10318.5prime Sequence
1143 bp (1030 high quality bases) assembled on 2010-11-12
> FMO10318.5prime
CAGTCGACATGATACCAAAAAAGACGACGGTTAAGGATTCACACATTGTG
AAAATAGCCGTGGAGCGAGAGGACCATATAGCGCAGTTGATAAATCTGGA
TCAAAGGCATCCGCTGGCAAGTAAAATCCAGGAAATTTGCAATGGTTGGT
CCATCAGCGATCACCAGAACTATGCACTCCAGTTCTACGAGCCCACTAAC
CGAAAGTACGTGACCGAAAAGAATCGCAATGAGATCAAGAATGGCTCCGT
ACTGCAGCTGCAGTATTCGCCATCCAAGACTGCCTGCGATGCCATGGAGG
TGCTGCTCAATGGCAGTCCACAGGAGAAGGCGCTGCGTCTAAAGGAGCTC
ACTTCCCTAAGCACCGATCACACATTTGCCCTGGAGTTCATCAAGGAGAA
GGGTCTCGACACACTCATTAAGATGATTGAGGATGGCGGCCAGACCAACG
AAGACATTCTGAAATACAGCCTGGCCAGCTTTGTGGAGCTGATGGAGCAC
GGCACGGTGTCCTGGGAGGTGCCGGAAAACTCATTCGTGGCCCGCAACAT
TGAGATCGTGCGAAACTTTCAGAAATATCCTACGAACTGTGGTGAGAGCG
CCCTGTCCAACTTGGAGAACATTGTTATGTGCAGCAATAAACATGTGCTT
GTTGCCGAGGACATCAAGCTGCAGGATATTCTCCGATTGCTTCAGGATGT
CAATTCGCCGGTGATGCGACAAAATGCCATAGCCCTGCTGAACGCTCTGT
TCGTCAAAGCAGACGAGGGCCGCCGCAGACCATTGCTCAAACTATTAGTG
CCAAGCAGTTCCGCCTGGCCCTTATCGGCAATGGACTGGGCACAGAGATG
ACCCACCAGCTGTACGTGCTGCAAACGTTGACTCTCGGCCTGTTGGAGAA
GCGCATGCGTATGAGATGACGCGCAGACCAGGACGCGCACGAGAAGATCA
GGAGCTGCGGCGCATTGCCTTCGACGATAATACCAACGCTTGAATCAAAC
GACGATCACATCCGTCGTGCGGTGGCTCCGGGAGCTGGCAATGTCAACTT
CTTCGGCAGTACTACAAAAAGCTGGGCCTCGGTGCGAATATTACCCTGCC
AGATTTCATGAAACGCCCGCCTGTATATACGCTTGGAATGCAT
FMO10318.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ced-12-RA | 2586 | CG5336-RA | 114..1258 | 9..1143 | 5145 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12098347..12099317 | 112..1077 | 4310 | 98.6 | Plus |
| 2L | 23513712 | 2L | 12097951..12098064 | 9..122 | 570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:11:02 has no hits.
FMO10318.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:09 Download gff for
FMO10318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ced-12-RA | 109..1206 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:30 Download gff for
FMO10318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ced-12-RA | 114..1211 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:31 Download gff for
FMO10318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ced-12-RA | 114..1211 | 9..1100 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:31 Download gff for
FMO10318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12097951..12098062 | 9..120 | 100 | -> | Plus |
| 2L | 12098356..12099341 | 121..1100 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:30 Download gff for
FMO10318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12097951..12098062 | 9..120 | 100 | -> | Plus |
| arm_2L | 12098356..12099341 | 121..1100 | 98 | | Plus |
