FMO10320.5prime Sequence
470 bp (470 high quality bases) assembled on 2010-11-12
> FMO10320.5prime
CAGTCGACATGGCAGTCGGCTTCATTGTAATCTTCAGCGCCATATTCGTC
CTGGCCCAAGGATCAAATCTTTTGCCCATTGAGCAGCAATCGGAGGTGCC
AATCCATTCTGGTGCTCCAGCGGCAGTCATTTCGCAAGGACAACAGTCTG
TGTCCCAGTCCGTTGGTTCTGCTTACGGTCAAGACCAAGGGTTGGCTGGT
GCACGACCCTATTGGGCTGCACCTCGTCCTGCTCTGGCTGCACCTCGTCC
TGCTGAGTCCTACGCTCGTCCTGCTGTGGCTGTACCTCGTCCTTCTGTGG
CTGCACCTCGTCCGGCTGTGTCCTACGCTCGTCCTGCAGCCGTGGTGGTT
CCTGCTTTGGTGGTTGCTCCTATTCGCCAGCCTCAGGGAGTCCCTGTCCC
AGCCGTTGTAGGAGCTAGTCAAGGAAATGTGTACCATGGTCGCCATCATG
GCGCAAGCTTTCTAGACCAT
FMO10320.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33333-RA | 576 | CG33333-RA | 18..461 | 9..452 | 2220 | 100 | Plus |
CG33333-RA | 576 | CG33333-RA | 224..283 | 278..337 | 225 | 91.7 | Plus |
CG33333-RA | 576 | CG33333-RA | 287..346 | 215..274 | 225 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17417484..17417927 | 9..452 | 2220 | 100 | Plus |
3R | 32079331 | 3R | 17417690..17417749 | 278..337 | 225 | 91.7 | Plus |
3R | 32079331 | 3R | 17417753..17417812 | 215..274 | 225 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:11:09 has no hits.
FMO10320.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:10 Download gff for
FMO10320.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33333-RA | 1..447 | 9..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:34 Download gff for
FMO10320.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33333-RA | 9..466 | 1..458 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:34 Download gff for
FMO10320.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33333-RA | 9..466 | 1..458 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:34 Download gff for
FMO10320.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17417475..17417932 | 1..458 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:34 Download gff for
FMO10320.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13243197..13243654 | 1..458 | 98 | | Plus |