FMO10322.5prime Sequence
1167 bp (1045 high quality bases) assembled on 2010-11-12
> FMO10322.5prime
CAGTCGACATGGTCTACTATCAATTGCGGGCCTCCAGGACGCCACTTCTC
TGCTGTTTGGGTCTTTTTGTTGTCTATCTGCTCTACCAGTCACTTGGATC
ACTCCAAGTGTTGAATAACCCACAGGGAACTATATCACAGCCAGCATCCC
GGCCCAAAAAGGTTGCTGTCGTTCACCATGGAGCCCATCCAGGAATCGAT
ACCGAAGGCAAGGAGAGCGCGGGATCGCAGCAGGAACCGAATCTGGAGGA
ACTGTTGCGGAGCAAAGAGGACGTGGACTGGGTGCGTCTGCGGGCTGACC
AGTGTGCCCCGTATCCCCGCTACGAAGACATCGAGTTTCCGAATCCCTAC
TTCCAGCTAACAAGGCATGAAAATCTATCTTACTATCTCTATGGGGCATA
CTACGACCGGAGGCCCAGGATACCGGAGATGGTGGTCCTCGGAATGGCCA
CCTACAATGGTTCCTATCCGGCCACCTATTTGCAGGTTTGGTACGATGGC
GATAACCAGCCAGAAAAGTTGCCCGTATACCAAAGCAAATTGGGCTGGTA
CAAGGAGTGGGGCCTTCCAGAGGGTGTTGTATTTCCTACGCTCCTAACGT
TTCAAATGAAATCCCAAAGGGTTCCACAGCTGGTGAGTCTGGTCTTCGAT
CCGTGTGCGGTGCCAACGAATGCCTTTAAGGTGGTACCACCGCCACCCGA
GGAGCCACCAAATGCACAACGTCCAAAGCGAATCGGAGTTTGTGTGAAAT
ATCTCCGATTTCCCGACGTCGACATGACCGATAGATTTGTGGAATGGCTG
GAACTGATGAGGCTACTGGGTGCCACCAAGGTGACCGCCTTCGATATTGG
ACTCCTTATGCCCAACACAAGGAGAACCCTTGCCCACTACACGGGAGCTG
GTGATGGATTCTTGGATCTGCGGAAATTCCGTTTCCCAATGAGACCGCAG
ATCACGAGACATTCCGTGCGATGATATTGAAGTGCTGCTGTACAATGACT
GTTTATACCGGAATCTGTACGATTCGATTTTGTGGCCGTGGTGGAAGGTG
GATGAAGGTAATAATGCACTGGGTGAGCCATCGCACTTGCCAGATTGCTG
AACCAATTGCAGGTTCAGATTGGAATAGCACCACTCCGCTCTAACCTAAT
GCTTCCGCAATGGTGTT
FMO10322.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12715-RB | 2107 | CG12715-RB | 37..1192 | 9..1162 | 5355 | 98.1 | Plus |
| CG12715-RA | 1959 | CG12715-RA | 37..1192 | 9..1162 | 5355 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13053786..13054764 | 1136..162 | 4295 | 98 | Minus |
| X | 23542271 | X | 13055139..13055292 | 162..9 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:08:59 has no hits.
FMO10322.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:15:47 Download gff for
FMO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12715-RA | 1..1159 | 9..1167 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:20:00 Download gff for
FMO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12715-RA | 28..1195 | 1..1167 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:49:11 Download gff for
FMO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12715-RA | 28..1195 | 1..1167 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:49:11 Download gff for
FMO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13053756..13054763 | 163..1167 | 97 | <- | Minus |
| X | 13055139..13055296 | 1..162 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:20:00 Download gff for
FMO10322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12947789..12948796 | 163..1167 | 97 | <- | Minus |
| arm_X | 12949172..12949329 | 1..162 | 97 | | Minus |
