Clone FMO10324 Report

Search the DGRC for FMO10324

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:24
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7656-RD
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10324.5prime Sequence

983 bp (983 high quality bases) assembled on 2010-11-12

> FMO10324.5prime
CAGTCGACATGACCACCGCCGCCTCCACATCGCAGCATGCGACATCGTCC
TCCACAATGATGGCGGGCTCTGGATCCTTGGCGACCTCGTCGTCCGCCGC
TGCCCCCACAACCACGCCCAGCAGCTCGGCCGTTCGCGCCCTGGCCATGG
AGTACAAGTCGCTGCAGGAAGAGCCGGTGGAGGGATTCCGCGTCAAGCTG
ATCAACGACGACAATCTGTTCGAATGGGAGGTGGCAATCTTCGGGCCACC
GGACACCCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAGTTCCCGC
ACGACTATCCATACTCACCGCCATCCATACGCTTCCTGACGAAGGTCTGG
CATCCGAATGTTTACGAGAACGGTGATCTGTGCATATCCATACTACATCC
GCCGGTGGATGATCCGCAGAGTGGCGAGCTGCCCTGCGAACGCTGGAATC
CCACGCAGAATGTGCGCACCATCCTGCTGTCGGTCATATCGCTGCTCAAT
GAGCCGAACACATTCTCGCCGGCCAACGTGGACGCCTCGGTCATGTACCG
CCGATGGCGGGACTCACAGGGTAAGGACAATGAGTATCCAAACATCATAC
GAAAACAGGCACTGGCCGCCAATGCCGAGGCCAAGCGGGAGGGCATTGTG
GTTCCGATGACCCTGGAGGACTACTGCCTGAAGCCCACGCGCAAGCCCAC
AACGGAGTCTGGCCTGCATGCCAACTTCTACGATGATGATTTCGATCTGG
AGACGGAGGATGATCTGCCATCTGATGATGACTTCGATGAGGACGACGAC
GATGATGAGGACGAGGATGAAGATGAGGACAGTGCCACGGCGCCGATTAG
CAAAAATAATGGAGGCAGCAGCAAGTGCAAGATCAACGGGCTGGTCAGAG
AGGCGGCCGCCGCCGGAGCGGACGATGCCGAATCCGCTGATGACAGCGGC
AAGGGCGAGACCACAGCAAGCTTTCTAGACCAT

FMO10324.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7656-RE 1234 CG7656-RE 153..1109 9..965 4755 99.8 Plus
CG7656-RD 1410 CG7656-RD 303..1259 9..965 4755 99.8 Plus
CG7656-RF 2027 CG7656-RF 303..1253 9..965 4655 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15587004..15587565 570..9 2810 100 Minus
3L 28110227 3L 15586205..15586603 965..567 1965 99.5 Minus
Blast to na_te.dros performed on 2014-11-26 17:10:43 has no hits.

FMO10324.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:05 Download gff for FMO10324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7656-RD 101..1060 9..969 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:17 Download gff for FMO10324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7656-RD 303..1262 9..969 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:19 Download gff for FMO10324.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7656-RD 303..1262 9..969 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:19 Download gff for FMO10324.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15586202..15586600 570..969 99 <- Minus
3L 15587005..15587565 9..569 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:17 Download gff for FMO10324.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15579302..15579700 570..969 99 <- Minus
arm_3L 15580105..15580665 9..569 100   Minus