Clone FMO10329 Report

Search the DGRC for FMO10329

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:29
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9941-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10329.5prime Sequence

1129 bp (1023 high quality bases) assembled on 2010-11-12

> FMO10329.5prime
CAGTCGACATGGGCAACTTTGTGAGCAGACAGAACGCGGCGGTGGAGGAG
GCCGATCCGAGCACGAACAATGCCTACAAGTATCCACCGAGAATGGGTAA
CTTCTTTGGCACCCACTTCATCATGGGCGGCGAGCGCTTCGACACGCCCC
AACCGGAATCGTACTTGTTTGGCGAGAATGCGGATCTCAATTTCCTGGGC
AATCGACCCACAGCCTTTCCGTATCCCCCGCCGCAGGCCAATGAACCGAC
GAAGACCCTGAAGAGTCTGGTCAACATTCGCAAGGAGTCGGTGCGTTTCG
TCAAGACGATGAACGACAAGAAGCTGGGCGGTGTACTCGAGAAGCCCAAG
ATGAAGGAGATTGATCGGGACTTGGATCTGGACAAGGAGAAGTCCAACGT
GACCATCGAGGATGTGGATGGAAATGTGCTCTGCTCGATGGGTTTGGGTG
GCGGTGATGCCGATATGACGCCCCCACCGCCGCCCTGCTCTTACAACATC
GAGTTTACCTTTGACTCGGACGCCAAGTGCGCCATTACCATTTACTATTT
CTGCTCGGAGGATGTCAGTCCCAGCGGCGTGACACTGGTGCCGCGCGAGG
GTCTCACCTCGGAGACGTACCACTACGAGAAGGGCATCAATCAGTGCTTC
TCGCAGCCGAGCCATGTCTTCAATCCGCAGCAGATGCCCGAGGATGAACT
GGGCTATAGTCCCGGCCGTGAACAGTATCCCGTGGCCATTCACTGTGTGG
TGGAGGAGGGCAGCGACGAGTGTCGGCAATCGCACACCACCATCTGTGTG
ATCGATCATCATCCGGAAAACGGCAGCTATGTGCTGCGTGCATTGAAGCA
AAGATCTTTGTGGATGGCTTGTGCTACCTGCTACAGGAGATCTATGGCAT
CGAGAACAGCCGTGAACATAACGTCTTCTGGACGAGAAAATCGACGATCA
TGGCAGCTAGTGTGTTATTTGCATGATTGAAACGAGGGATAGCCTCATCC
TGCCCTGCCGCCATCTCTGTTGTGCAATTCATGCCCGAATCCCTGCGCTT
TCGCCCAAAATTGTCCCATTTGTCCGCCTCGTTCGGCGTTGCTCAATCCT
GTCTCCGAAGGAATAACAGCATTATCGTC

FMO10329.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9941-RA 3113 CG9941-RA 302..1395 9..1093 4985 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13720605..13721676 1074..9 4825 97.9 Minus
Blast to na_te.dros performed on 2014-11-26 17:11:28 has no hits.

FMO10329.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:14 Download gff for FMO10329.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9941-RA 343..1443 1..1093 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:46 Download gff for FMO10329.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9941-RA 295..1395 1..1093 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:45 Download gff for FMO10329.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9941-RA 295..1395 1..1093 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:45 Download gff for FMO10329.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13720583..13721681 1..1093 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:46 Download gff for FMO10329.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13614616..13615714 1..1093 97   Minus