FMO10330.5prime Sequence
1099 bp (1013 high quality bases) assembled on 2010-11-12
> FMO10330.5prime
CAGTCGACATGCCAGCTCTGGGTCTCCTGTTCGCCTCCATCGGCATTGCC
GTGCTGGCGATGGGTGTGCCGCATTGCAGGGGCTACACCATCAAGGAGGA
CGAATCCTTCCTGCAGCAACCGCACTATGCTAGCCAAGAGCAGCTGGAGG
ACCTGTTTGCTGGCCTGGAGAAGGCGTACCCCAATCAGGCCAAAGTCCAC
TTCCTTGGTCGATCTCTAGAAGGACGAAATCTGCTCGCCCTGCAAATCTC
GCGGAACACCCGGTCGCGGAATCTCCTTACACCTCCAGTAAAGTACATAG
CCAATATGCATGGAGACGAAACGGTGGGCAGGCAGCTCCTTGTTTATATG
GCACAATATCTGCTCGGTAATCACGAAAGAATCAGCGACCTGGGCCAGCT
GGTCAACAGCACCGATATCTACTTGGTGCCCACGATGAATCCAGATGGCT
ATGCGTTGTCCCAGGAAGGCAACTGCGAGTCGCTGCCCAACTATGTGGGT
CGTGGCAATGCGGCCAACATCGATTTGAATCGCGATTTCCCCGATCGCCT
GGAGCAGAGCCATGTCCACCAGTTGCGCGCCCAGTCTCGTCAGCCGGAAA
CAGCAGCCCTGGTAAATTGGATCGTTAGCAAACCGTTTGTGCTCTCCGCC
AATTTCCATGGCGGAGCTGTTGTGGCCAGCTATCCCTATGACAACTCCTT
GGCTCACAATGAGTGCTGCGAGGAGAGTTTGACTCCGGATGATCGGGTCT
TCAAGCAGCTGGCCCACACCTATTCTGACAACCATCCGATTATGAGAAAG
GGCAACAATTGCAACGATAGCTTCTCGGGAGGTATCACCAACGGAGCCCA
CTGGTATGAGTTGTCCGGTGGAATGCAGACTTTAACTATGCGTTTAGCAA
CTGTTTCGAGCTGACCATCGAGTTGTCGTGCTGCAGTATCCGGCAGCAAG
CACTTTGCCCAGAATGCAGCGGACAGCATCCTGCTGCAGCTGCTGCGCAG
CACATATCGCATCAGGCCTGGTGACCGATGCAGTGGCTTTCATAGCGATG
CATGTTCTACGTGCTGACATAAGAGAAACCCATGGCGCCCTCACCTGCG
FMO10330.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
svr-RN | 4986 | CG4122-RN | 196..1293 | 9..1084 | 4890 | 97.5 | Plus |
svr-RM | 5611 | CG4122-RM | 196..1293 | 9..1084 | 4890 | 97.5 | Plus |
svr-RL | 2851 | CG4122-RL | 196..1293 | 9..1084 | 4890 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 500153..500609 | 9..465 | 2270 | 99.8 | Plus |
X | 23542271 | X | 502287..502548 | 701..960 | 1210 | 99.2 | Plus |
X | 23542271 | X | 501982..502221 | 462..701 | 1200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:11:31 has no hits.
FMO10330.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:14 Download gff for
FMO10330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
svr-RG | 469..1581 | 1..1095 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:49 Download gff for
FMO10330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
svr-RB | 469..1581 | 1..1095 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:48 Download gff for
FMO10330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
svr-RL | 190..1302 | 1..1095 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:48 Download gff for
FMO10330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 501985..502220 | 465..700 | 100 | -> | Plus |
X | 500147..500608 | 1..464 | 98 | -> | Plus |
X | 502287..502701 | 701..1095 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:49 Download gff for
FMO10330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 394180..394641 | 1..464 | 98 | -> | Plus |
arm_X | 396018..396253 | 465..700 | 100 | -> | Plus |
arm_X | 396320..396734 | 701..1095 | 92 | | Plus |