Clone FMO10332 Report

Search the DGRC for FMO10332

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:103
Well:32
Vector:pMK33-CFH-BD
Associated Gene/TranscriptAct57B-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO10332.5prime Sequence

1100 bp (1030 high quality bases) assembled on 2010-11-12

> FMO10332.5prime
CAGTCGACATGTGTGACGATGAAGTTGCTGCTCTGGTCGTTGACAATGGC
TCCGGCATGTGCAAGGCCGGTTTCGCCGGTGATGACGCTCCCCGTGCCGT
CTTCCCCTCCATCGTCGGTCGTCCACGCCACCAGGGTGTGATGGTCGGTA
TGGGCCAGAAGGACTCGTACGTCGGTGATGAGGCCCAGTCCAAGCGTGGT
ATCCTCACCCTGAAATACCCCATCGAGCACGGTATCATCACCAACTGGGA
TGATATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGTGTTG
CCCCCGAGGAGCACCCCGTCCTGCTGACTGAGGCCCCCCTGAACCCCAAG
GCTAACCGCGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACTCGCC
CGCCATGTACGTCGCCATCCAGGCCGTGCTCTCCCTGTACGCCTCCGGTC
GTACCACCGGTATCGTTCTGGACTCCGGTGATGGTGTCTCCCACACCGTC
CCCATCTATGAGGGTTATGCTCTGCCCCATGCCATCCTCCGTCTGGATCT
GGCTGGTCGCGATTTGACCGACTACCTGATGAAGATCCTGACCGAGCGCG
GCTACTCTTTCACCACCACCGCTGAGCGTGAAATTGTCCGTGACATCAAG
GAGAAGTTGTGCTATGTTGCCCTGGACTTCGAGCAGGAGATGGCCACCGC
CGCCGCCTCCACCTCCCTGGAGAAGTCGTACGAGCTTCCCGACGGACAGG
TGATCACCATCGGCAACGAGCGTTTCCGTTGCCCCGAGTCCCTGTTCCAG
CCTTCCTTCCTGGGAATGGAATCCTGCGGCATCCACGAGACCGTCTACAC
TCCATCATGAAGTGCGATGTGGATATCCGTAAGGACCTGTACGCCAACAT
CGTCATGTCCGGTGGCACCACCATGTACCCCGGTATTGCCGATCGTATGC
AAAGGAGATCACTCCCTGGCCCCATCACATCAGGATCAGATCATTGCTCC
CCAGAGGGCGCAAATACTCGGTCTTGGATCGTGGCTCATCTGGCCTCTCT
GTCCACCTTCCAGCGATGTGGATCTCCAGGAGGAGTACGACGAGTTCCGC

FMO10332.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
Act57B-RA 1724 CG10067-RA 97..1192 9..1095 5105 98.5 Plus
Act87E-RC 1853 CG18290-RC 82..1177 9..1095 3770 90.3 Plus
Act87E-RB 1643 CG18290-RB 158..1253 9..1095 3770 90.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20944843..20945899 48..1095 4630 97.8 Plus
3R 32079331 3R 13426604..13427699 9..1095 3490 89.8 Plus
X 23542271 X 5902698..5903653 9..962 3420 91 Plus
3R 32079331 3R 15440616..15441543 9..935 2925 87.9 Plus
2R 25286936 2R 6014455..6015400 953..9 2535 84.8 Minus
2R 25286936 2R 20944117..20944157 9..49 205 100 Plus
Blast to na_te.dros performed on 2014-11-26 17:11:38 has no hits.

FMO10332.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:15 Download gff for FMO10332.5prime
Subject Subject Range Query Range Percent Splice Strand
Act57B-RA 90..1188 9..1100 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:53 Download gff for FMO10332.5prime
Subject Subject Range Query Range Percent Splice Strand
Act57B-RA 97..1195 9..1100 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:52 Download gff for FMO10332.5prime
Subject Subject Range Query Range Percent Splice Strand
Act57B-RA 97..1195 9..1100 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:52 Download gff for FMO10332.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 20944117..20944156 9..48 100 -> Plus
2R 20944844..20945902 49..1100 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:53 Download gff for FMO10332.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16831622..16831661 9..48 100 -> Plus
arm_2R 16832349..16833407 49..1100 98   Plus