FMO10332.5prime Sequence
1100 bp (1030 high quality bases) assembled on 2010-11-12
> FMO10332.5prime
CAGTCGACATGTGTGACGATGAAGTTGCTGCTCTGGTCGTTGACAATGGC
TCCGGCATGTGCAAGGCCGGTTTCGCCGGTGATGACGCTCCCCGTGCCGT
CTTCCCCTCCATCGTCGGTCGTCCACGCCACCAGGGTGTGATGGTCGGTA
TGGGCCAGAAGGACTCGTACGTCGGTGATGAGGCCCAGTCCAAGCGTGGT
ATCCTCACCCTGAAATACCCCATCGAGCACGGTATCATCACCAACTGGGA
TGATATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGTGTTG
CCCCCGAGGAGCACCCCGTCCTGCTGACTGAGGCCCCCCTGAACCCCAAG
GCTAACCGCGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACTCGCC
CGCCATGTACGTCGCCATCCAGGCCGTGCTCTCCCTGTACGCCTCCGGTC
GTACCACCGGTATCGTTCTGGACTCCGGTGATGGTGTCTCCCACACCGTC
CCCATCTATGAGGGTTATGCTCTGCCCCATGCCATCCTCCGTCTGGATCT
GGCTGGTCGCGATTTGACCGACTACCTGATGAAGATCCTGACCGAGCGCG
GCTACTCTTTCACCACCACCGCTGAGCGTGAAATTGTCCGTGACATCAAG
GAGAAGTTGTGCTATGTTGCCCTGGACTTCGAGCAGGAGATGGCCACCGC
CGCCGCCTCCACCTCCCTGGAGAAGTCGTACGAGCTTCCCGACGGACAGG
TGATCACCATCGGCAACGAGCGTTTCCGTTGCCCCGAGTCCCTGTTCCAG
CCTTCCTTCCTGGGAATGGAATCCTGCGGCATCCACGAGACCGTCTACAC
TCCATCATGAAGTGCGATGTGGATATCCGTAAGGACCTGTACGCCAACAT
CGTCATGTCCGGTGGCACCACCATGTACCCCGGTATTGCCGATCGTATGC
AAAGGAGATCACTCCCTGGCCCCATCACATCAGGATCAGATCATTGCTCC
CCAGAGGGCGCAAATACTCGGTCTTGGATCGTGGCTCATCTGGCCTCTCT
GTCCACCTTCCAGCGATGTGGATCTCCAGGAGGAGTACGACGAGTTCCGC
FMO10332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Act57B-RA | 1724 | CG10067-RA | 97..1192 | 9..1095 | 5105 | 98.5 | Plus |
Act87E-RC | 1853 | CG18290-RC | 82..1177 | 9..1095 | 3770 | 90.3 | Plus |
Act87E-RB | 1643 | CG18290-RB | 158..1253 | 9..1095 | 3770 | 90.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20944843..20945899 | 48..1095 | 4630 | 97.8 | Plus |
3R | 32079331 | 3R | 13426604..13427699 | 9..1095 | 3490 | 89.8 | Plus |
X | 23542271 | X | 5902698..5903653 | 9..962 | 3420 | 91 | Plus |
3R | 32079331 | 3R | 15440616..15441543 | 9..935 | 2925 | 87.9 | Plus |
2R | 25286936 | 2R | 6014455..6015400 | 953..9 | 2535 | 84.8 | Minus |
2R | 25286936 | 2R | 20944117..20944157 | 9..49 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:11:38 has no hits.
FMO10332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:15 Download gff for
FMO10332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Act57B-RA | 90..1188 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:53 Download gff for
FMO10332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Act57B-RA | 97..1195 | 9..1100 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:52 Download gff for
FMO10332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Act57B-RA | 97..1195 | 9..1100 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:52 Download gff for
FMO10332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20944117..20944156 | 9..48 | 100 | -> | Plus |
2R | 20944844..20945902 | 49..1100 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:53 Download gff for
FMO10332.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16831622..16831661 | 9..48 | 100 | -> | Plus |
arm_2R | 16832349..16833407 | 49..1100 | 98 | | Plus |