FMO10333.5prime Sequence
1146 bp (1049 high quality bases) assembled on 2010-11-12
> FMO10333.5prime
CAGTCGACATGTCGTGCGCAAAGCCGCATATTTTGATTATTGAACCGTTT
TACGGGGGCAGTCACAAACAGCTGATCGGCGCACTGATCGAGGGTCTCAA
CCATGGCGACAGCGAGATATTCAGCCTTCCCGCCAAGAAATGGCACTGGC
GAGCACGCACCTCTGCCCTCCACTTCGCCCAGCTGATTCCGCGCGATCAC
GCATTCCGGGTGCTTTTCGCCAGCTCCGTGCTCAGCCTGGCCGAGCTGAT
TGGTCTGCGTCCGGATCTGGCCGCTTGCCGGAAGATCGTCTACTTCCACG
AGAACCAGCTGATCTATCCGGTGCGCGAGGTGAAGCAGCGCGATTGTCAA
TACGGTTTCAATGAGATACTCTCCTGTCTTGCCGCAGACATGGTGCTCTT
CAATTCCCAATTCAACTGCAACTCGTTTTTGGATAATGTTCAGCCCTTTC
TGAATATGCAGCCAGACTTTAAAATCAAGCATATTCGCGAGCAAATCGAG
AAGAAATGCCAAGTGCTGTACTTTCCCGTCAATTTCGAACGGTTTCCCAT
TCGGAAGGAGTGCGTAAAGGGGGAGACTGCTGAGGATCTGGATGAGAAGT
GCATCCATCTTATTTGGCCACATCGCTGGGAGCACGATAAGAATCCCAAA
CTACTGGTGGATACGCTCTGTCAGCTCCATGAGCGACAAGTGGACTTCAA
GGTGACTATTTGTGGCGAGAGTTACCAGGAGATACCGGAGGAATTCGAGC
ATATACAGGAGAAACTGGGCAGCAAGCTGGTGAACTTTGGCCATCTGGAG
CGTGAAGAGTACTTGAAGACCCTGCTGACTGGGGACATTGTGATATCAAC
TGCCGACCATGAGTTTTTTGGAGTAGCAATGCTGGAGGCCGCTTTCTGCG
GCTGTATCCCATTGCGCCCAACAATTGGTCTACCCGGAAATCTACCCAAA
GAAACCTCTACAACACTCATGCGCTGACGAGAAGCTCTACACTTTTTGTA
AGATGCGAGGTCTTTCGCAAGCAGCGCCGATCAAATTCTTGAGAAACTTT
ATTTCGATCGTTTTCGGGCGAAAGGACTATGCCAATATTCTTGGACATAT
TCAATAAACATATTGCCGACGAACAAGTGCAGCTTTCCGGACCATG
FMO10333.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15914-RA | 1422 | CG15914-RA | 25..1153 | 8..1126 | 5100 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15853941..15854701 | 376..1126 | 3020 | 95.5 | Plus |
| X | 23542271 | X | 15853605..15853888 | 93..376 | 1420 | 100 | Plus |
| X | 23542271 | X | 15853445..15853532 | 8..95 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:11:41 has no hits.
FMO10333.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-15 11:16:16 Download gff for
FMO10333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15914-RA | 1..1134 | 9..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:21:55 Download gff for
FMO10333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15914-RA | 17..1159 | 1..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:50:52 Download gff for
FMO10333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15914-RA | 17..1159 | 1..1132 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:50:52 Download gff for
FMO10333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15853437..15853530 | 1..93 | 96 | -> | Plus |
| X | 15853606..15853888 | 94..376 | 100 | -> | Plus |
| X | 15853942..15854707 | 377..1132 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:21:55 Download gff for
FMO10333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15747470..15747563 | 1..93 | 96 | -> | Plus |
| arm_X | 15747639..15747921 | 94..376 | 100 | -> | Plus |
| arm_X | 15747975..15748740 | 377..1132 | 96 | | Plus |
